SequenceVariation.jl/CHANGELOG.md

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2022-07-05 15:53:34 +00:00
# Changelog
All notable changes to this project will be documented in this file.
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0)
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
## [Unreleased]
### Added
- Mutation types (`Substitution`, `Deletion`, `Insertion`)
- `Variant` type to store groups of mutations together
- `Variation` type to store and compare individual mutations
- `reconstruct!` function to build mutated sequences from `Variant`s
- `Variant` constructor to automatically detect mutations from a `BioAlignments.PairwiseAlignment`
2022-07-13 21:52:11 +00:00
- Methods to get reference and alternate bases from a `Variation`
2022-07-05 15:53:34 +00:00
[unreleased]: https://github.com/BioJulia/SequenceVariation.jl