millironx/SequenceVariation.jl
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Code Issues Releases Packages Activity

Mark edits(::Variant) as private API

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This commit is contained in:
Thomas A. Christensen II 2023-01-03 21:35:16 -06:00
parent a573693737
commit 386acba8ab
2 changed files with 3 additions and 3 deletions
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2
src/Variant.jl
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@ -124,7 +124,7 @@ function Variant(
return Variant(ref, edits) return Variant(ref, edits)
end end
edits(v::Variant) = v.edits _edits(v::Variant) = v.edits
reference(v::Variant) = v.ref reference(v::Variant) = v.ref
Base.:(==)(x::Variant, y::Variant) = x.ref == y.ref && x.edits == y.edits Base.:(==)(x::Variant, y::Variant) = x.ref == y.ref && x.edits == y.edits

4
src/Variation.jl
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@ -119,8 +119,8 @@ function translate(var::Variation{S,T}, aln::PairwiseAlignment{S,S}) where {S,T}
end end
function variations(v::Variant{S,T}) where {S,T} function variations(v::Variant{S,T}) where {S,T}
vs = Vector{Variation{S,T}}(undef, length(edits(v))) vs = Vector{Variation{S,T}}(undef, length(_edits(v)))
for (i, e) in enumerate(edits(v)) for (i, e) in enumerate(_edits(v))
vs[i] = Variation{S,T}(reference(v), e) vs[i] = Variation{S,T}(reference(v), e)
end end
return vs return vs