millironx/SequenceVariation.jl
1
0
Fork 0
mirror of https://github.com/MillironX/SequenceVariation.jl.git synced 2024-11-22 13:29:56 +00:00
Code Issues Releases Packages Activity

Add function to get variations from variant

Browse source
This commit is contained in:
Thomas A. Christensen II 2022-06-15 13:06:20 -05:00
parent dbdc575d75
commit 6d7a93604a
Signed by: millironx
GPG key ID: 139C07724802BC5D
1 changed files with 10 additions and 1 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

11
src/SequenceVariation.jl
View file

@ -456,12 +456,21 @@ function translate(var::Variation{S, T}, aln::PairwiseAlignment{S, S}) where {S,
end
end
function variations(v::Variant)
vs = Vector{Variation}(undef, length(edits(v)))
for (i, e) in enumerate(edits(v))
vs[i] = Variation(reference(v), e)
end
return vs
end
export Insertion,
Deletion,
Substitution,
Variant,
Variation,
reference,
mutation
mutation,
variations
end # module