From abff6692d49052e88966d40fdb92194a7290b0e9 Mon Sep 17 00:00:00 2001
From: "Thomas A. Christensen II" <25492070+MillironX@users.noreply.github.com>
Date: Tue, 6 Dec 2022 10:01:46 -0600
Subject: [PATCH] Add test for combined clips

---
 test/runtests.jl | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/test/runtests.jl b/test/runtests.jl
index 673201a..d4dca18 100644
--- a/test/runtests.jl
+++ b/test/runtests.jl
@@ -115,4 +115,7 @@ end
 
     # Test for ending soft clip
     @test Variant(PairwiseAlignment(AlignedSequence(mutseq, Alignment("7=3S", 1, 1)), refseq)) == refvar
+
+    # Test for ending soft+hard clip
+    @test Variant(PairwiseAlignment(AlignedSequence(mutseq, Alignment("7=3S2H", 1, 1)), refseq)) == refvar
 end