millironx/SequenceVariation.jl
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Thomas A. Christensen II 3b33c85d00 Add type parameterization to variations getter 
I have encountered some cases where having a non-parameterized vector can
crash a downstream process. I don't yet know how to make a MWE of that, but
adding type parameters fixes my problem, and doesn't break any tests here.
2022-11-22 17:55:41 +00:00
.github Remove 32-bit arches from unit testing CI workflow 2022-07-11 19:07:07 +00:00
docs Release v0.1.1 (#19) 2022-07-21 12:59:47 +00:00
src Add type parameterization to variations getter 2022-11-22 17:55:41 +00:00
test Add constructor for Variant based on Variations 2022-07-21 12:33:35 +00:00
.gitignore Add Julia gitignore 2022-07-05 09:19:06 -05:00
CHANGELOG.md Update CHANGELOG for v0.1.2 2022-10-04 11:55:58 -05:00
LICENSE Add license 2022-07-11 13:25:28 -05:00
Project.toml Update project version number to v0.1.2 2022-10-04 11:55:58 -05:00
README.md Release v0.1.1 (#19) 2022-07-21 12:59:47 +00:00

README.md

SequenceVariation

Project Status: WIP – Initial development is in progress, but there has not yet been a stable, usable release suitable for the public. Latest Release MIT license Stable documentation Latest documentation

This project follows the semver pro forma and uses the OneFlow branching model.

Description

SequenceVariation provides a Julia vocabulary for comparing genetic mutations within biological sequences.

Installation

You can install SequenceVariation from the Julia REPL. Press ] to enter pkg mode, and enter the following:

add SequenceVariation

Testing

SequenceVariation is tested against Julia 1.X on Linux, OS X, and Windows.

Latest build status:

Unit Tests Documentation codecov

Contributing

We appreciate contributions from users including reporting bugs, fixing issues, improving performance and adding new features.

Take a look at the contributing files for detailed contributor and maintainer guidelines, and code of conduct.

Financial contributions

We also welcome financial contributions in full transparency on our open collective. Anyone can file an expense. If the expense makes sense for the development the core contributors and the person who filed the expense will be reimbursed.

Backers & Sponsors

Thank you to all our backers and sponsors!

Love our work and community? Become a backer.

backers

Does your company use BioJulia? Help keep BioJulia feature rich and healthy by sponsoring the project. Your logo will show up here with a link to your website.

Questions?

If you have a question about contributing or using BioJulia software, come on over and chat to us on the Julia Slack workspace, or you can try the Bio category of the Julia discourse site.