2020-01-17 18:24:09 +00:00
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using Test
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2020-02-02 11:50:25 +00:00
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using BioGenerics
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using FormatSpecimens
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2020-02-20 10:19:07 +00:00
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using GenomicFeatures
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using XAM
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2021-02-28 12:06:17 +00:00
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using CodecBGZF
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2020-02-02 11:50:25 +00:00
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2020-02-20 10:19:07 +00:00
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import BioAlignments: Alignment, AlignmentAnchor, OP_START, OP_MATCH, OP_DELETE
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2020-02-02 11:50:25 +00:00
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import BioGenerics.Exceptions: MissingFieldException
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2020-01-17 18:24:09 +00:00
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import BioSequences: @dna_str, @aa_str
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2020-02-02 11:44:55 +00:00
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2020-01-17 18:24:09 +00:00
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# Generate a random range within `range`.
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function randrange(range)
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x = rand(range)
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y = rand(range)
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if x < y
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return x:y
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else
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return y:x
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end
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end
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2020-05-27 11:21:12 +00:00
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include("test_sam.jl")
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include("test_bam.jl")
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2020-08-13 06:45:51 +00:00
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include("test_crosscheck.jl")
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2021-04-01 02:55:03 +00:00
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include("test_issues.jl")
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