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build based on 8910ae3

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zeptodoctor 2020-01-18 02:50:25 +00:00
parent 47268162f4
commit 30908d5998
12 changed files with 15764 additions and 1028 deletions

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/*
* The default CSS style for Documenter.jl generated sites
*
* Heavily inspired by the Julia Sphinx theme
* https://github.com/JuliaLang/JuliaDoc
* which extends the sphinx_rtd_theme
* https://github.com/snide/sphinx_rtd_theme
*
* Part of Documenter.jl
* https://github.com/JuliaDocs/Documenter.jl
*
* License: MIT
*/
/* fonts */
body, input {
font-family: 'Lato', 'Helvetica Neue', Arial, sans-serif;
font-size: 16px;
color: #222;
text-rendering: optimizeLegibility;
}
pre, code, kbd {
font-family: 'Roboto Mono', Monaco, courier, monospace;
font-size: 0.90em;
}
pre code {
font-size: 1em;
}
a {
color: #2980b9;
text-decoration: none;
}
a:hover {
color: #3091d1;
}
a:visited {
color: #9b59b6;
}
body {
line-height: 1.5;
}
h1 {
font-size: 1.75em;
}
/* Unless the <h1> the is very first thing on the page (i.e. the second element
* in the <article>, * after the <header>, we add some additional styling to it
* to make it stand out a bit more. This way we get a reasonable fallback if CSS3
* selectors are not supported in the browser.
*/
article > h1:not(:nth-child(2)) {
margin: 2.5em 0 0;
padding-bottom: 0.30em;
border-bottom: 1px solid #e5e5e5;
}
h2 {
font-size: 1.50em;
margin: 2.3em 0 0;
padding-bottom: 0.25em;
border-bottom: 1px solid #e5e5e5;
}
h3 {
font-size: 1.25em;
margin: 2.0em 0 0;
}
h4 { font-size: 1.15em; }
h5 { font-size: 1.10em; }
h6 { font-size: 1em; }
h4, h5, h6 {
margin-top: 1.5em;
margin-bottom: 1em;
}
img {
max-width: 100%;
}
table {
border-collapse: collapse;
margin: 1em 0;
}
th, td {
border: 1px solid #e1e4e5;
padding: 0.5em 1em;
}
th {
border-bottom-width: 2px;
}
tr:nth-child(even) {
background-color: #f3f6f6;
}
hr {
border: 0;
border-top: 1px solid #e5e5e5;
}
/* Inline code and code blocks */
code {
padding: 0.1em;
background-color: rgba(0,0,0,.04);
border-radius: 3px;
}
pre {
background-color: #f5f5f5;
border: 1px solid #dddddd;
border-radius: 3px;
padding: 0.5em;
overflow: auto;
}
pre code {
padding: 0;
background-color: initial;
}
kbd {
font-size: 0.70em;
display: inline-block;
padding: 0.1em 0.5em 0.4em 0.5em;
line-height: 1.0em;
color: #444d56;
vertical-align: middle;
background-color: #fafbfc;
border: solid 1px #c6cbd1;
border-bottom-color: #959da5;
border-radius: 3px;
box-shadow: inset 0 -1px 0 #959da5;
}
/* Headers in admonitions and docstrings */
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article section.docstring h1 {
font-size: 1.25em;
}
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article section.docstring h2 {
font-size: 1.10em;
}
.admonition h3,
.admonition h4,
.admonition h5,
.admonition h6,
article section.docstring h3,
article section.docstring h4,
article section.docstring h5,
article section.docstring h6 {
font-size: 1em;
}
/* Navigation */
nav.toc {
position: fixed;
top: 0;
left: 0;
bottom: 0;
width: 20em;
display: flex;
flex-flow: column nowrap;
overflow-y: auto;
padding: 1em 0 0 0;
background-color: #fcfcfc;
box-shadow: inset -14px 0px 5px -12px rgb(210,210,210);
}
nav.toc .logo {
margin: 0 auto;
display: block;
max-height: 6em;
max-width: 18em;
}
nav.toc h1 {
text-align: center;
margin-top: .57em;
margin-bottom: 0;
}
nav.toc select {
display: block;
height: 2em;
flex-shrink: 0;
padding: 0 1.6em 0 1em;
min-width: 7em;
max-width: 90%;
max-width: calc(100% - 5em);
margin: 0 auto;
font-size: .83em;
border: 1px solid #c9c9c9;
border-radius: 1em;
/* TODO: doesn't seem to be centered on Safari */
text-align: center;
text-align-last: center;
appearance: none;
-moz-appearance: none;
-webkit-appearance: none;
background: white url("arrow.svg");
background-size: 1.155em;
background-repeat: no-repeat;
background-position: right;
}
nav.toc select:hover {
border: 1px solid #a0a0a0;
}
nav.toc select option {
text-align: center;
}
nav.toc input {
display: block;
height: 2em;
width: 90%;
width: calc(100% - 5em);
margin: 1.2em auto;
padding: 0 1em;
border: 1px solid #c9c9c9;
border-radius: 1em;
font-size: .83em;
}
nav.toc > ul * {
margin: 0;
}
nav.toc > ul {
min-height: 2em;
overflow-y: auto;
margin: 0;
}
nav.toc > ul > li:last-child {
padding-bottom: 1em;
}
nav.toc ul {
color: #404040;
padding: 0;
list-style: none;
}
nav.toc ul .toctext {
color: inherit;
display: block;
}
nav.toc ul a:hover {
color: #fcfcfc;
background-color: #4e4a4a;
}
nav.toc ul.internal a {
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display: block;
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nav.toc ul.internal a:hover {
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}
nav.toc ul.internal {
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box-shadow: inset -14px 0px 5px -12px rgb(210,210,210);
list-style: none;
}
nav.toc ul.internal li.toplevel {
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font-weight: bold;
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nav.toc ul.internal li.toplevel:first-child {
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}
nav.toc .toctext {
padding-top: 0.3em;
padding-bottom: 0.3em;
padding-right: 1em;
}
nav.toc ul .toctext {
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}
nav.toc ul ul .toctext {
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}
nav.toc ul ul ul .toctext {
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nav.toc li.current > .toctext {
border-top: 1px solid #c9c9c9;
border-bottom: 1px solid #c9c9c9;
color: #404040;
font-weight: bold;
background-color: white;
}
nav.toc ul::-webkit-scrollbar {
width: .4em;
background: none;
}
nav.toc ul::-webkit-scrollbar-thumb {
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background: #c9c9c9;
}
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border-radius: 5px;
background: #aaaaaa;
}
article {
margin-left: 20em;
min-width: 20em;
max-width: 48em;
padding: 2em;
}
article > header {}
article > header div#topbar {
display: none;
}
article > header nav ul {
display: inline-block;
list-style: none;
margin: 0;
padding: 0;
}
article > header nav li {
display: inline-block;
padding-right: 0.2em;
}
article > header nav li:before {
content: "»";
padding-right: 0.2em;
}
article > header .edit-page {
float: right;
}
article > footer {}
article > footer a.prev {
float: left;
}
article > footer a.next {
float: right;
}
article > footer a .direction:after {
content: ": ";
}
article hr {
margin: 1em 0;
}
article section.docstring {
border: 1px solid #ddd;
margin: 0.5em 0;
padding: 0.5em;
border-radius: 3px;
}
article section.docstring .docstring-header {
margin-bottom: 1em;
}
article section.docstring .docstring-binding {
color: #333;
font-weight: bold;
}
article section.docstring .docstring-category {
font-style: italic;
}
article section.docstring a.source-link {
display: block;
font-weight: bold;
}
.nav-anchor,
.nav-anchor:hover,
.nav-anchor:visited {
color: #333;
}
/*
* Admonitions
*
* Colors (title, body)
* warning: #f0b37e #ffedcc (orange)
* note: #6ab0de #e7f2fa (blue)
* tip: #1abc9c #dbfaf4 (green)
*/
.admonition {
border-radius: 3px;
background-color: #eeeeee;
margin: 1em 0;
}
.admonition-title {
border-radius: 3px 3px 0 0;
background-color: #9b9b9b;
padding: 0.15em 0.5em;
}
.admonition-text {
padding: 0.5em;
}
.admonition-text > :first-child {
margin-top: 0;
}
.admonition-text > :last-child {
margin-bottom: 0;
}
.admonition > .admonition-title:before {
font-family: "FontAwesome";
margin-right: 5px;
content: "\f06a";
}
.admonition.warning > .admonition-title {
background-color: #f0b37e;
}
.admonition.warning {
background-color: #ffedcc;
}
.admonition.note > .admonition-title {
background-color: #6ab0de;
}
.admonition.note {
background-color: #e7f2fa;
}
.admonition.tip > .admonition-title {
background-color: #1abc9c;
}
.admonition.tip {
background-color: #dbfaf4;
}
/* footnotes */
.footnote {
padding-left: 0.8em;
border-left: 2px solid #ccc;
}
/* Search page */
#search-results .category {
font-size: smaller;
}
/* Overriding the <code> block style of highligh.js.
* We have to override the padding and the background-color, since we style this
* part ourselves. Specifically, we style the <pre> surrounding the <code>, while
* highlight.js applies the .hljs style directly to the <code> tag.
*/
.hljs {
background-color: transparent;
padding: 0;
}
@media only screen and (max-width: 768px) {
nav.toc {
position: fixed;
width: 16em;
left: -16em;
-webkit-overflow-scrolling: touch;
-webkit-transition-property: left; /* Safari */
-webkit-transition-duration: 0.3s; /* Safari */
transition-property: left;
transition-duration: 0.3s;
-webkit-transition-timing-function: ease-out; /* Safari */
transition-timing-function: ease-out;
z-index: 2;
box-shadow: 5px 0px 5px 0px rgb(210,210,210);
}
nav.toc.show {
left: 0;
}
article {
margin-left: 0;
padding: 3em 0.9em 0 0.9em; /* top right bottom left */
overflow-wrap: break-word;
}
article > header {
position: fixed;
left: 0;
z-index: 1;
}
article > header nav, hr {
display: none;
}
article > header div#topbar {
display: block; /* is mobile */
position: fixed;
width: 100%;
height: 1.5em;
padding-top: 1em;
padding-bottom: 1em;
background-color: #fcfcfc;
box-shadow: 0 1px 3px rgba(0,0,0,.26);
top: 0;
-webkit-transition-property: top; /* Safari */
-webkit-transition-duration: 0.3s; /* Safari */
transition-property: top;
transition-duration: 0.3s;
}
article > header div#topbar.headroom--unpinned.headroom--not-top.headroom--not-bottom {
top: -4em;
-webkit-transition-property: top; /* Safari */
-webkit-transition-duration: 0.7s; /* Safari */
transition-property: top;
transition-duration: 0.7s;
}
article > header div#topbar span {
width: 80%;
height: 1.5em;
margin-top: -0.1em;
margin-left: 0.9em;
font-size: 1.2em;
overflow: hidden;
}
article > header div#topbar a.fa-bars {
float: right;
padding: 0.6em;
margin-top: -0.6em;
margin-right: 0.3em;
font-size: 1.5em;
}
article > header div#topbar a.fa-bars:visited {
color: #3091d1;
}
article table {
overflow-x: auto;
display: block;
}
article div.MathJax_Display {
overflow: scroll;
}
article span.MathJax {
overflow: hidden;
}
}
@media only screen and (max-width: 320px) {
body {
font-size: 15px;
}
}

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@ -1,132 +1,260 @@
/* // Generated by Documenter.jl
* Part of Documenter.jl
* https://github.com/JuliaDocs/Documenter.jl
*
* License: MIT
*/
requirejs.config({ requirejs.config({
paths: { paths: {
'jquery': 'https://cdnjs.cloudflare.com/ajax/libs/jquery/3.1.1/jquery.min', 'highlight-julia': 'https://cdnjs.cloudflare.com/ajax/libs/highlight.js/9.15.10/languages/julia.min',
'jqueryui': 'https://cdnjs.cloudflare.com/ajax/libs/jqueryui/1.12.0/jquery-ui.min', 'headroom': 'https://cdnjs.cloudflare.com/ajax/libs/headroom/0.10.3/headroom.min',
'headroom': 'https://cdnjs.cloudflare.com/ajax/libs/headroom/0.9.3/headroom.min', 'jqueryui': 'https://cdnjs.cloudflare.com/ajax/libs/jqueryui/1.12.1/jquery-ui.min',
'mathjax': 'https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.1/MathJax.js?config=TeX-AMS_HTML', 'katex-auto-render': 'https://cdnjs.cloudflare.com/ajax/libs/KaTeX/0.11.1/contrib/auto-render.min',
'highlight': 'https://cdnjs.cloudflare.com/ajax/libs/highlight.js/9.12.0/highlight.min', 'jquery': 'https://cdnjs.cloudflare.com/ajax/libs/jquery/3.4.1/jquery.min',
'highlight-julia': 'https://cdnjs.cloudflare.com/ajax/libs/highlight.js/9.12.0/languages/julia.min', 'headroom-jquery': 'https://cdnjs.cloudflare.com/ajax/libs/headroom/0.10.3/jQuery.headroom.min',
'highlight-julia-repl': 'https://cdnjs.cloudflare.com/ajax/libs/highlight.js/9.12.0/languages/julia-repl.min', 'katex': 'https://cdnjs.cloudflare.com/ajax/libs/KaTeX/0.11.1/katex.min',
'highlight': 'https://cdnjs.cloudflare.com/ajax/libs/highlight.js/9.15.10/highlight.min',
'highlight-julia-repl': 'https://cdnjs.cloudflare.com/ajax/libs/highlight.js/9.15.10/languages/julia-repl.min',
},
shim: {
"highlight-julia": {
"deps": [
"highlight"
]
},
"katex-auto-render": {
"deps": [
"katex"
]
},
"headroom-jquery": {
"deps": [
"jquery",
"headroom"
]
},
"highlight-julia-repl": {
"deps": [
"highlight"
]
}
}
});
////////////////////////////////////////////////////////////////////////////////
require(['jquery', 'katex', 'katex-auto-render'], function($, katex, renderMathInElement) {
$(document).ready(function() {
renderMathInElement(
document.body,
{
"delimiters": [
{
"left": "$",
"right": "$",
"display": false
}, },
shim: { {
'mathjax' : { "left": "$$",
exports: "MathJax" "right": "$$",
}, "display": true
'highlight-julia': ['highlight'], },
'highlight-julia-repl': ['highlight'], {
"left": "\\[",
"right": "\\]",
"display": true
} }
]
}
);
})
})
////////////////////////////////////////////////////////////////////////////////
require(['jquery', 'highlight', 'highlight-julia', 'highlight-julia-repl'], function($, hljs) {
$(document).ready(function() {
hljs.initHighlighting();
})
})
////////////////////////////////////////////////////////////////////////////////
require(['jquery', 'headroom', 'headroom-jquery'], function($, Headroom) {
// Manages the top navigation bar (hides it when the user starts scrolling down on the
// mobile).
window.Headroom = Headroom; // work around buggy module loading?
$(document).ready(function() {
$('#documenter .docs-navbar').headroom({
"tolerance": {"up": 10, "down": 10},
});
})
})
////////////////////////////////////////////////////////////////////////////////
require(['jquery'], function($) {
// Modal settings dialog
$(document).ready(function() {
var settings = $('#documenter-settings');
$('#documenter-settings-button').click(function(){
settings.toggleClass('is-active');
});
// Close the dialog if X is clicked
$('#documenter-settings button.delete').click(function(){
settings.removeClass('is-active');
});
// Close dialog if ESC is pressed
$(document).keyup(function(e) {
if (e.keyCode == 27) settings.removeClass('is-active');
});
}); });
// Load MathJax })
require(['mathjax'], function(MathJax) { ////////////////////////////////////////////////////////////////////////////////
MathJax.Hub.Config({ require(['jquery'], function($) {
"tex2jax": {
inlineMath: [['$','$'], ['\\(','\\)']], // Manages the showing and hiding of the sidebar.
processEscapes: true $(document).ready(function() {
} var sidebar = $("#documenter > .docs-sidebar");
}); var sidebar_button = $("#documenter-sidebar-button")
MathJax.Hub.Config({ sidebar_button.click(function(ev) {
config: ["MMLorHTML.js"], ev.preventDefault();
jax: [ sidebar.toggleClass('visible');
"input/TeX", if (sidebar.hasClass('visible')) {
"output/HTML-CSS", // Makes sure that the current menu item is visible in the sidebar.
"output/NativeMML" $("#documenter .docs-menu a.is-active").focus();
], }
extensions: [ });
"MathMenu.js", $("#documenter > .docs-main").bind('click', function(ev) {
"MathZoom.js", if ($(ev.target).is(sidebar_button)) {
"TeX/AMSmath.js", return;
"TeX/AMSsymbols.js", }
"TeX/autobold.js", if (sidebar.hasClass('visible')) {
"TeX/autoload-all.js" sidebar.removeClass('visible');
] }
}); });
MathJax.Hub.Config({
TeX: { equationNumbers: { autoNumber: "AMS" } }
});
}) })
require(['jquery', 'highlight', 'highlight-julia', 'highlight-julia-repl'], function($, hljs) { // Resizes the package name / sitename in the sidebar if it is too wide.
$(document).ready(function() { // Inspired by: https://github.com/davatron5000/FitText.js
hljs.initHighlighting(); $(document).ready(function() {
}) e = $("#documenter .docs-autofit");
function resize() {
var L = parseInt(e.css('max-width'), 10);
var L0 = e.width();
if(L0 > L) {
var h0 = parseInt(e.css('font-size'), 10);
e.css('font-size', L * h0 / L0);
// TODO: make sure it survives resizes?
}
}
// call once and then register events
resize();
$(window).resize(resize);
$(window).on('orientationchange', resize);
});
// Scroll the navigation bar to the currently selected menu item
$(document).ready(function() {
var sidebar = $("#documenter .docs-menu").get(0);
var active = $("#documenter .docs-menu .is-active").get(0);
if(typeof active !== 'undefined') {
sidebar.scrollTop = active.offsetTop - sidebar.offsetTop - 15;
}
})
}) })
////////////////////////////////////////////////////////////////////////////////
require(['jquery'], function($) {
function set_theme(theme) {
var active = null;
var disabled = [];
for (var i = 0; i < document.styleSheets.length; i++) {
var ss = document.styleSheets[i];
var themename = ss.ownerNode.getAttribute("data-theme-name");
if(themename === null) continue; // ignore non-theme stylesheets
// Find the active theme
if(themename === theme) active = ss;
else disabled.push(ss);
}
if(active !== null) {
active.disabled = false;
if(active.ownerNode.getAttribute("data-theme-primary") === null) {
document.getElementsByTagName('html')[0].className = "theme--" + theme;
} else {
document.getElementsByTagName('html')[0].className = "";
}
disabled.forEach(function(ss){
ss.disabled = true;
});
}
// Store the theme in localStorage
if(typeof(window.localStorage) !== "undefined") {
window.localStorage.setItem("documenter-theme", theme);
} else {
console.error("Browser does not support window.localStorage");
}
}
// Theme picker setup
$(document).ready(function() {
// onchange callback
$('#documenter-themepicker').change(function themepick_callback(ev){
var themename = $('#documenter-themepicker option:selected').attr('value');
set_theme(themename);
});
// Make sure that the themepicker displays the correct theme when the theme is retrieved
// from localStorage
if(typeof(window.localStorage) !== "undefined") {
var theme = window.localStorage.getItem("documenter-theme");
if(theme !== null) {
$('#documenter-themepicker option').each(function(i,e) {
e.selected = (e.value === theme);
})
}
}
})
})
////////////////////////////////////////////////////////////////////////////////
require(['jquery'], function($) {
// update the version selector with info from the siteinfo.js and ../versions.js files // update the version selector with info from the siteinfo.js and ../versions.js files
require(['jquery'], function($) { $(document).ready(function() {
$(document).ready(function() { var version_selector = $("#documenter .docs-version-selector");
var version_selector = $("#version-selector"); var version_selector_select = $("#documenter .docs-version-selector select");
// add the current version to the selector based on siteinfo.js, but only if the selector is empty version_selector_select.change(function(x) {
if (typeof DOCUMENTER_CURRENT_VERSION !== 'undefined' && $('#version-selector > option').length == 0) { target_href = version_selector_select.children("option:selected").get(0).value;
var option = $("<option value='#' selected='selected'>" + DOCUMENTER_CURRENT_VERSION + "</option>"); window.location.href = target_href;
version_selector.append(option); });
}
if (typeof DOC_VERSIONS !== 'undefined') { // add the current version to the selector based on siteinfo.js, but only if the selector is empty
var existing_versions = $('#version-selector > option'); if (typeof DOCUMENTER_CURRENT_VERSION !== 'undefined' && $('#version-selector > option').length == 0) {
var existing_versions_texts = existing_versions.map(function(i,x){return x.text}); var option = $("<option value='#' selected='selected'>" + DOCUMENTER_CURRENT_VERSION + "</option>");
DOC_VERSIONS.forEach(function(each) { version_selector_select.append(option);
var version_url = documenterBaseURL + "/../" + each; }
var existing_id = $.inArray(each, existing_versions_texts);
// if not already in the version selector, add it as a new option,
// otherwise update the old option with the URL and enable it
if (existing_id == -1) {
var option = $("<option value='" + version_url + "'>" + each + "</option>");
version_selector.append(option);
} else {
var option = existing_versions[existing_id];
option.value = version_url;
option.disabled = false;
}
});
}
// only show the version selector if the selector has been populated if (typeof DOC_VERSIONS !== 'undefined') {
if ($('#version-selector > option').length > 0) { var existing_versions = version_selector_select.children("option");
version_selector.css("visibility", "visible"); var existing_versions_texts = existing_versions.map(function(i,x){return x.text});
} DOC_VERSIONS.forEach(function(each) {
var version_url = documenterBaseURL + "/../" + each;
// Scroll the navigation bar to the currently selected menu item var existing_id = $.inArray(each, existing_versions_texts);
$("nav.toc > ul").get(0).scrollTop = $(".current").get(0).offsetTop - $("nav.toc > ul").get(0).offsetTop; // if not already in the version selector, add it as a new option,
}) // otherwise update the old option with the URL and enable it
if (existing_id == -1) {
var option = $("<option value='" + version_url + "'>" + each + "</option>");
version_selector_select.append(option);
} else {
var option = existing_versions[existing_id];
option.value = version_url;
option.disabled = false;
}
});
}
// only show the version selector if the selector has been populated
if (version_selector_select.children("option").length > 0) {
version_selector.toggleClass("visible");
}
}) })
// mobile
require(['jquery', 'headroom'], function($, Headroom) {
$(document).ready(function() {
var navtoc = $("nav.toc");
$("nav.toc li.current a.toctext").click(function() {
navtoc.toggleClass('show');
});
$("article > header div#topbar a.fa-bars").click(function(ev) {
ev.preventDefault();
navtoc.toggleClass('show');
if (navtoc.hasClass('show')) {
var title = $("article > header div#topbar span").text();
$("nav.toc ul li a:contains('" + title + "')").focus();
}
});
$("article#docs").bind('click', function(ev) {
if ($(ev.target).is('div#topbar a.fa-bars')) {
return;
}
if (navtoc.hasClass('show')) {
navtoc.removeClass('show');
}
});
if ($("article > header div#topbar").css('display') == 'block') {
var headroom = new Headroom(document.querySelector("article > header div#topbar"), {"tolerance": {"up": 10, "down": 10}});
headroom.init();
}
})
}) })

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@ -1,250 +1,248 @@
/* // Generated by Documenter.jl
* Part of Documenter.jl
* https://github.com/JuliaDocs/Documenter.jl
*
* License: MIT
*/
// parseUri 1.2.2
// (c) Steven Levithan <stevenlevithan.com>
// MIT License
function parseUri (str) {
var o = parseUri.options,
m = o.parser[o.strictMode ? "strict" : "loose"].exec(str),
uri = {},
i = 14;
while (i--) uri[o.key[i]] = m[i] || "";
uri[o.q.name] = {};
uri[o.key[12]].replace(o.q.parser, function ($0, $1, $2) {
if ($1) uri[o.q.name][$1] = $2;
});
return uri;
};
parseUri.options = {
strictMode: false,
key: ["source","protocol","authority","userInfo","user","password","host","port","relative","path","directory","file","query","anchor"],
q: {
name: "queryKey",
parser: /(?:^|&)([^&=]*)=?([^&]*)/g
},
parser: {
strict: /^(?:([^:\/?#]+):)?(?:\/\/((?:(([^:@]*)(?::([^:@]*))?)?@)?([^:\/?#]*)(?::(\d*))?))?((((?:[^?#\/]*\/)*)([^?#]*))(?:\?([^#]*))?(?:#(.*))?)/,
loose: /^(?:(?![^:@]+:[^:@\/]*@)([^:\/?#.]+):)?(?:\/\/)?((?:(([^:@]*)(?::([^:@]*))?)?@)?([^:\/?#]*)(?::(\d*))?)(((\/(?:[^?#](?![^?#\/]*\.[^?#\/.]+(?:[?#]|$)))*\/?)?([^?#\/]*))(?:\?([^#]*))?(?:#(.*))?)/
}
};
requirejs.config({ requirejs.config({
paths: { paths: {
'jquery': 'https://cdnjs.cloudflare.com/ajax/libs/jquery/3.1.1/jquery.min', 'lunr': 'https://cdnjs.cloudflare.com/ajax/libs/lunr.js/2.3.6/lunr.min',
'lunr': 'https://cdnjs.cloudflare.com/ajax/libs/lunr.js/2.3.5/lunr.min', 'lodash': 'https://cdnjs.cloudflare.com/ajax/libs/lodash.js/4.17.15/lodash.min',
'lodash': 'https://cdnjs.cloudflare.com/ajax/libs/lodash.js/4.17.11/lodash.min', 'jquery': 'https://cdnjs.cloudflare.com/ajax/libs/jquery/3.4.1/jquery.min',
} }
}); });
////////////////////////////////////////////////////////////////////////////////
require(['jquery', 'lunr', 'lodash'], function($, lunr, _) {
var currentScript = document.currentScript; $(document).ready(function() {
// parseUri 1.2.2
// (c) Steven Levithan <stevenlevithan.com>
// MIT License
function parseUri (str) {
var o = parseUri.options,
m = o.parser[o.strictMode ? "strict" : "loose"].exec(str),
uri = {},
i = 14;
require(["jquery", "lunr", "lodash"], function($, lunr, _) { while (i--) uri[o.key[i]] = m[i] || "";
$("#search-form").submit(function(e) {
e.preventDefault() uri[o.q.name] = {};
uri[o.key[12]].replace(o.q.parser, function ($0, $1, $2) {
if ($1) uri[o.q.name][$1] = $2;
});
return uri;
};
parseUri.options = {
strictMode: false,
key: ["source","protocol","authority","userInfo","user","password","host","port","relative","path","directory","file","query","anchor"],
q: {
name: "queryKey",
parser: /(?:^|&)([^&=]*)=?([^&]*)/g
},
parser: {
strict: /^(?:([^:\/?#]+):)?(?:\/\/((?:(([^:@]*)(?::([^:@]*))?)?@)?([^:\/?#]*)(?::(\d*))?))?((((?:[^?#\/]*\/)*)([^?#]*))(?:\?([^#]*))?(?:#(.*))?)/,
loose: /^(?:(?![^:@]+:[^:@\/]*@)([^:\/?#.]+):)?(?:\/\/)?((?:(([^:@]*)(?::([^:@]*))?)?@)?([^:\/?#]*)(?::(\d*))?)(((\/(?:[^?#](?![^?#\/]*\.[^?#\/.]+(?:[?#]|$)))*\/?)?([^?#\/]*))(?:\?([^#]*))?(?:#(.*))?)/
}
};
$("#search-form").submit(function(e) {
e.preventDefault()
})
// list below is the lunr 2.1.3 list minus the intersect with names(Base)
// (all, any, get, in, is, which) and (do, else, for, let, where, while, with)
// ideally we'd just filter the original list but it's not available as a variable
lunr.stopWordFilter = lunr.generateStopWordFilter([
'a',
'able',
'about',
'across',
'after',
'almost',
'also',
'am',
'among',
'an',
'and',
'are',
'as',
'at',
'be',
'because',
'been',
'but',
'by',
'can',
'cannot',
'could',
'dear',
'did',
'does',
'either',
'ever',
'every',
'from',
'got',
'had',
'has',
'have',
'he',
'her',
'hers',
'him',
'his',
'how',
'however',
'i',
'if',
'into',
'it',
'its',
'just',
'least',
'like',
'likely',
'may',
'me',
'might',
'most',
'must',
'my',
'neither',
'no',
'nor',
'not',
'of',
'off',
'often',
'on',
'only',
'or',
'other',
'our',
'own',
'rather',
'said',
'say',
'says',
'she',
'should',
'since',
'so',
'some',
'than',
'that',
'the',
'their',
'them',
'then',
'there',
'these',
'they',
'this',
'tis',
'to',
'too',
'twas',
'us',
'wants',
'was',
'we',
'were',
'what',
'when',
'who',
'whom',
'why',
'will',
'would',
'yet',
'you',
'your'
])
// add . as a separator, because otherwise "title": "Documenter.Anchors.add!"
// would not find anything if searching for "add!", only for the entire qualification
lunr.tokenizer.separator = /[\s\-\.]+/
// custom trimmer that doesn't strip @ and !, which are used in julia macro and function names
lunr.trimmer = function (token) {
return token.update(function (s) {
return s.replace(/^[^a-zA-Z0-9@!]+/, '').replace(/[^a-zA-Z0-9@!]+$/, '')
}) })
}
// list below is the lunr 2.1.3 list minus the intersect with names(Base) lunr.Pipeline.registerFunction(lunr.stopWordFilter, 'juliaStopWordFilter')
// (all, any, get, in, is, which) and (do, else, for, let, where, while, with) lunr.Pipeline.registerFunction(lunr.trimmer, 'juliaTrimmer')
// ideally we'd just filter the original list but it's not available as a variable
lunr.stopWordFilter = lunr.generateStopWordFilter([
'a',
'able',
'about',
'across',
'after',
'almost',
'also',
'am',
'among',
'an',
'and',
'are',
'as',
'at',
'be',
'because',
'been',
'but',
'by',
'can',
'cannot',
'could',
'dear',
'did',
'does',
'either',
'ever',
'every',
'from',
'got',
'had',
'has',
'have',
'he',
'her',
'hers',
'him',
'his',
'how',
'however',
'i',
'if',
'into',
'it',
'its',
'just',
'least',
'like',
'likely',
'may',
'me',
'might',
'most',
'must',
'my',
'neither',
'no',
'nor',
'not',
'of',
'off',
'often',
'on',
'only',
'or',
'other',
'our',
'own',
'rather',
'said',
'say',
'says',
'she',
'should',
'since',
'so',
'some',
'than',
'that',
'the',
'their',
'them',
'then',
'there',
'these',
'they',
'this',
'tis',
'to',
'too',
'twas',
'us',
'wants',
'was',
'we',
'were',
'what',
'when',
'who',
'whom',
'why',
'will',
'would',
'yet',
'you',
'your'
])
// add . as a separator, because otherwise "title": "Documenter.Anchors.add!" var index = lunr(function () {
// would not find anything if searching for "add!", only for the entire qualification this.ref('location')
lunr.tokenizer.separator = /[\s\-\.]+/ this.field('title',{boost: 100})
this.field('text')
documenterSearchIndex['docs'].forEach(function(e) {
this.add(e)
}, this)
})
var store = {}
// custom trimmer that doesn't strip @ and !, which are used in julia macro and function names documenterSearchIndex['docs'].forEach(function(e) {
lunr.trimmer = function (token) { store[e.location] = {title: e.title, category: e.category}
return token.update(function (s) { })
return s.replace(/^[^a-zA-Z0-9@!]+/, '').replace(/[^a-zA-Z0-9@!]+$/, '')
$(function(){
searchresults = $('#documenter-search-results');
searchinfo = $('#documenter-search-info');
searchbox = $('#documenter-search-query');
function update_search(querystring) {
tokens = lunr.tokenizer(querystring)
results = index.query(function (q) {
tokens.forEach(function (t) {
q.term(t.toString(), {
fields: ["title"],
boost: 100,
usePipeline: false,
editDistance: 0,
wildcard: lunr.Query.wildcard.NONE
})
q.term(t.toString(), {
fields: ["title"],
boost: 10,
usePipeline: false,
editDistance: 2,
wildcard: lunr.Query.wildcard.NONE
})
q.term(t.toString(), {
fields: ["text"],
boost: 1,
usePipeline: true,
editDistance: 0,
wildcard: lunr.Query.wildcard.NONE
})
}) })
})
searchinfo.text("Number of results: " + results.length)
searchresults.empty()
results.forEach(function(result) {
data = store[result.ref]
link = $('<a class="docs-label">'+data.title+'</a>')
link.attr('href', documenterBaseURL+'/'+result.ref)
cat = $('<span class="docs-category">('+data.category+')</span>')
li = $('<li>').append(link).append(" ").append(cat)
searchresults.append(li)
})
} }
lunr.Pipeline.registerFunction(lunr.stopWordFilter, 'juliaStopWordFilter') function update_search_box() {
lunr.Pipeline.registerFunction(lunr.trimmer, 'juliaTrimmer') querystring = searchbox.val()
update_search(querystring)
}
var index = lunr(function () { searchbox.keyup(_.debounce(update_search_box, 250))
this.ref('location') searchbox.change(update_search_box)
this.field('title')
this.field('text') search_query_uri = parseUri(window.location).queryKey["q"]
documenterSearchIndex['docs'].forEach(function(e) { if(search_query_uri !== undefined) {
this.add(e) search_query = decodeURIComponent(search_query_uri.replace(/\+/g, '%20'))
}, this) searchbox.val(search_query)
}) }
var store = {} update_search_box();
})
})
documenterSearchIndex['docs'].forEach(function(e) {
store[e.location] = {title: e.title, category: e.category}
})
$(function(){
function update_search(querystring) {
tokens = lunr.tokenizer(querystring)
results = index.query(function (q) {
tokens.forEach(function (t) {
q.term(t.toString(), {
fields: ["title"],
boost: 100,
usePipeline: false,
editDistance: 0,
wildcard: lunr.Query.wildcard.NONE
})
q.term(t.toString(), {
fields: ["title"],
boost: 10,
usePipeline: false,
editDistance: 2,
wildcard: lunr.Query.wildcard.NONE
})
q.term(t.toString(), {
fields: ["text"],
boost: 1,
usePipeline: true,
editDistance: 0,
wildcard: lunr.Query.wildcard.NONE
})
})
})
$('#search-info').text("Number of results: " + results.length)
$('#search-results').empty()
results.forEach(function(result) {
data = store[result.ref]
link = $('<a>')
link.text(data.title)
link.attr('href', documenterBaseURL+'/'+result.ref)
cat = $('<span class="category">('+data.category+')</span>')
li = $('<li>').append(link).append(" ").append(cat)
$('#search-results').append(li)
})
}
function update_search_box() {
querystring = $('#search-query').val()
update_search(querystring)
}
$('#search-query').keyup(_.debounce(update_search_box, 250))
$('#search-query').change(update_search_box)
search_query_uri = parseUri(window.location).queryKey["q"]
if(search_query_uri !== undefined) {
search_query = decodeURIComponent(search_query_uri.replace(/\+/g, '%20'))
$("#search-query").val(search_query)
}
update_search_box();
})
}) })

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// Small function to quickly swap out themes. Gets put into the <head> tag..
function set_theme_from_local_storage() {
// Browser does not support Web Storage, bail early.
if(typeof(window.localStorage) === "undefined") return;
// Get the user-picked theme from localStorage. May be `null`, which means the default
// theme.
var theme = window.localStorage.getItem("documenter-theme");
// Initialize a few variables for the loop:
//
// - active: will contain the index of the theme that should be active. Note that there
// is no guarantee that localStorage contains sane values. If `active` stays `null`
// we either could not find the theme or it is the default (primary) theme anyway.
// Either way, we then need to stick to the primary theme.
//
// - disabled: style sheets that should be disabled (i.e. all the theme style sheets
// that are not the currently active theme)
var active = null; var disabled = [];
for (var i = 0; i < document.styleSheets.length; i++) {
var ss = document.styleSheets[i];
// The <link> tag of each style sheet is expected to have a data-theme-name attribute
// which must contain the name of the theme. The names in localStorage much match this.
var themename = ss.ownerNode.getAttribute("data-theme-name");
// attribute not set => non-theme stylesheet => ignore
if(themename === null) continue;
// To distinguish the default (primary) theme, it needs to have the data-theme-primary
// attribute set.
var isprimary = (ss.ownerNode.getAttribute("data-theme-primary") !== null);
// If we find a matching theme (and it's not the default), we'll set active to non-null
if(!isprimary && themename === theme) active = i;
// Store the style sheets of inactive themes so that we could disable them
if(themename !== theme) disabled.push(ss);
}
if(active !== null) {
// If we did find an active theme, we'll (1) add the theme--$(theme) class to <html>
document.getElementsByTagName('html')[0].className = "theme--" + theme;
// and (2) disable all the other theme stylesheets
disabled.forEach(function(ss){
ss.disabled = true;
});
}
}
set_theme_from_local_storage();

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<!DOCTYPE html> <!DOCTYPE html>
<html lang="en"><head><meta charset="UTF-8"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><title>Search · XAM.jl</title><link href="https://cdnjs.cloudflare.com/ajax/libs/normalize/4.2.0/normalize.min.css" rel="stylesheet" type="text/css"/><link href="https://fonts.googleapis.com/css?family=Lato|Roboto+Mono" rel="stylesheet" type="text/css"/><link href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/4.6.3/css/font-awesome.min.css" rel="stylesheet" type="text/css"/><link href="https://cdnjs.cloudflare.com/ajax/libs/highlight.js/9.12.0/styles/default.min.css" rel="stylesheet" type="text/css"/><script>documenterBaseURL=".."</script><script src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.2.0/require.min.js" data-main="../assets/documenter.js"></script><script src="../siteinfo.js"></script><script src="../../versions.js"></script><link href="../assets/documenter.css" rel="stylesheet" type="text/css"/></head><body><nav class="toc"><h1>XAM.jl</h1><select id="version-selector" onChange="window.location.href=this.value" style="visibility: hidden"></select><form class="search" id="search-form" action><input id="search-query" name="q" type="text" placeholder="Search docs"/></form><ul><li><a class="toctext" href="../">Home</a></li><li><a class="toctext" href="../hts-files/">SAM and BAM</a></li><li><span class="toctext">API Reference</span><ul><li><a class="toctext" href="../api/public/">Public</a></li></ul></li></ul></nav><article><header><nav><ul><li>Search</li></ul></nav><hr/><div id="topbar"><span>Search</span><a class="fa fa-bars" href="#"></a></div></header><h1>Search</h1><p id="search-info">Number of results: <span id="search-results-number">loading...</span></p><ul id="search-results"></ul></article></body><script src="../search_index.js"></script><script src="../assets/search.js"></script></html> <html lang="en"><head><meta charset="UTF-8"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><title>Search · XAM.jl</title><link href="https://fonts.googleapis.com/css?family=Lato|Roboto+Mono" rel="stylesheet" type="text/css"/><link href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.11.2/css/fontawesome.min.css" rel="stylesheet" type="text/css"/><link href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.11.2/css/solid.min.css" rel="stylesheet" type="text/css"/><link href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.11.2/css/brands.min.css" rel="stylesheet" type="text/css"/><link href="https://cdnjs.cloudflare.com/ajax/libs/KaTeX/0.11.1/katex.min.css" rel="stylesheet" type="text/css"/><script>documenterBaseURL=".."</script><script src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.6/require.min.js" data-main="../assets/documenter.js"></script><script src="../siteinfo.js"></script><script src="../../versions.js"></script><link class="docs-theme-link" rel="stylesheet" type="text/css" href="../assets/themes/documenter-dark.css" data-theme-name="documenter-dark"/><link class="docs-theme-link" rel="stylesheet" type="text/css" href="../assets/themes/documenter-light.css" data-theme-name="documenter-light" data-theme-primary/><script src="../assets/themeswap.js"></script></head><body><div id="documenter"><nav class="docs-sidebar"><div class="docs-package-name"><span class="docs-autofit">XAM.jl</span></div><form class="docs-search" action><input class="docs-search-query" id="documenter-search-query" name="q" type="text" placeholder="Search docs"/></form><ul class="docs-menu"><li><a class="tocitem" href="../">Home</a></li><li><a class="tocitem" href="../hts-files/">SAM and BAM</a></li><li><span class="tocitem">API Reference</span><ul><li><a class="tocitem" href="../api/public/">Public</a></li></ul></li></ul><div class="docs-version-selector field has-addons"><div class="control"><span class="docs-label button is-static is-size-7">Version</span></div><div class="docs-selector control is-expanded"><div class="select is-fullwidth is-size-7"><select id="documenter-version-selector"></select></div></div></div></nav><div class="docs-main"><header class="docs-navbar"><nav class="breadcrumb"><ul class="is-hidden-mobile"><li class="is-active"><a href>Search</a></li></ul><ul class="is-hidden-tablet"><li class="is-active"><a href>Search</a></li></ul></nav><div class="docs-right"><a class="docs-settings-button fas fa-cog" id="documenter-settings-button" href="#" title="Settings"></a><a class="docs-sidebar-button fa fa-bars is-hidden-desktop" id="documenter-sidebar-button" href="#"></a></div></header><article><p id="documenter-search-info">Loading search...</p><ul id="documenter-search-results"></ul></article></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> on <span class="colophon-date" title="Saturday 18 January 2020 02:50">Saturday 18 January 2020</span>. Using Julia version 1.3.0.</p></section><footer class="modal-card-foot"></footer></div></div></div></body><script src="../search_index.js"></script><script src="../assets/search.js"></script></html>

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