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Check that EOF_BLOCK gets written

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This commit is contained in:
Ciarán O'Mara 2023-05-02 14:56:48 +10:00
parent 10c1aacd4d
commit 560a5cd8df
1 changed files with 10 additions and 2 deletions
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12
test/test_bam.jl
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@ -209,6 +209,14 @@
close(reader) close(reader)
close(writer) close(writer)
# Check that EOF_BLOCK gets written.
nbytes = filesize(path)
@test BAM.BGZFStreams.EOF_BLOCK == open(path) do io
seek(io, nbytes - length(BAM.BGZFStreams.EOF_BLOCK))
read(io)
end
reader = open(BAM.Reader, path) reader = open(BAM.Reader, path)
@test header(reader) == header_original @test header(reader) == header_original
@ -247,12 +255,12 @@
index = BAM.BAI(filepath * ".bai") index = BAM.BAI(filepath * ".bai")
reader = open(BAM.Reader, filepath, index=index) reader = open(BAM.Reader, filepath, index=index)
@test isa(eachoverlap(reader, "chr1", 1:100), BAM.OverlapIterator) @test isa(eachoverlap(reader, "chr1", 1:100), BAM.OverlapIterator)
close(reader) close(reader)
@test_throws ErrorException open(BAM.Reader, filepath, index=1234) @test_throws ErrorException open(BAM.Reader, filepath, index=1234)
end end