Thomas A. Christensen II
e6f542a368
Rather than keep a copy of the BioAlignments cigar constructor embedded in this function, have it call the existing constructor. There may be performance implications for using `cigar` instead of `cigar_rle`, but having a second copy of the constructor here is an antipattern if I've ever seen one, so prioritise stable code over performant code. |
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XAM.jl
This project follows the semver pro forma and uses the git-flow branching model.
Description
The XAM package provides I/O and utilities for manipulating SAM and BAM formatted alignment map files.
Installation
You can install the XAM package from the Julia REPL.
Press ] to enter pkg mode, then enter the following command:
add XAM
If you are interested in the cutting edge of the development, please check out the develop branch to try new features before release.
Testing
XAM is tested against Julia 1.X on Linux, OS X, and Windows.
Latest build status:
Contributing
We appreciate contributions from users including reporting bugs, fixing issues, improving performance and adding new features.
Take a look at the contributing files detailed contributor and maintainer guidelines, and code of conduct.
Financial contributions
We also welcome financial contributions in full transparency on our open collective. Anyone can file an expense. If the expense makes sense for the development the core contributors and the person who filed the expense will be reimbursed.
Backers & Sponsors
Thank you to all our backers and sponsors!
Love our work and community? Become a backer.
Does your company use BioJulia? Help keep BioJulia feature rich and healthy by sponsoring the project. Your logo will show up here with a link to your website.
Questions?
If you have a question about contributing or using BioJulia software, come on over and chat to us on the Julia Slack workspace, or you can try the Bio category of the Julia discourse site.