1
0
Fork 0
mirror of https://github.com/MillironX/beefblup.git synced 2024-12-13 05:31:59 +00:00

Use Julia error/warn systems instead of printing to stdout

This commit is contained in:
Thomas A. Christensen II 2021-06-19 10:01:51 -05:00
parent f985f4a700
commit 610c80e7c9
Signed by: millironx
GPG key ID: 139C07724802BC5D
3 changed files with 23 additions and 16 deletions

View file

@ -1,8 +1,8 @@
id,birthdate,dam,sire,year,sex,weaning_weight
1,1/1/1990,,,1990,male,354
2,1/1/1990,,,1990,female,251
3,1/1/1991,,1,1991,male,327
4,1/1/1991,,1,1991,female,328
5,1/1/1991,2,1,1991,male,301
6,1/1/1991,2,,1991,female,270
7,1/1/1992,,,1992,male,330
id,birthdate,dam,sire,year,sex,species,weaning_weight
1,1/1/1990,,,1990,male,cow,354
2,1/1/1990,,,1990,female,cow,251
3,1/1/1991,,1,1991,male,cow,327
4,1/1/1991,,1,1991,female,cow,328
5,1/1/1991,2,1,1991,male,cow,301
6,1/1/1991,2,,1991,female,cow,270
7,1/1/1992,,,1992,male,cow,330

1 id birthdate dam sire year sex species weaning_weight
2 1 1/1/1990 1990 male cow 354
3 2 1/1/1990 1990 female cow 251
4 3 1/1/1991 1 1991 male cow 327
5 4 1/1/1991 1 1991 female cow 328
6 5 1/1/1991 2 1 1991 male cow 301
7 6 1/1/1991 2 1991 female cow 270
8 7 1/1/1992 1992 male cow 330

13
gtktest.jl Normal file
View file

@ -0,0 +1,13 @@
using Gtk
openpath = open_dialog_native(
"Select a datasheet")
# GtkNullContainer(),
# ("*.csv", GtkFileFilter("*.csv", name="Comma-separated values"))
# )
# savepath = save_dialog_native(
# "Save your results",
# GtkNullContainer(),
# (GtkFileFilter("*.txt", name="Results file"),
# "*.txt")
# )

View file

@ -18,7 +18,6 @@ using Gtk
# Main entry-level function - acts just like the script
function beefblup()
### Prompt User
# Ask for an input spreadsheet
path = open_dialog_native(
"Select a beefblup worksheet",
@ -75,10 +74,7 @@ fixedfx = select(data, Not([:id, :birthdate, :sire, :dam]))[:,1:end-1]
# Find any columns that need to be deleted
for i in 1:ncol(fixedfx)
if length(unique(fixedfx[:,i])) <= 1
colname = names(fixedfx)[i]
print("Column '")
print(colname)
print("' does not have any unique animals and will be removed from this analysis\n")
@warn string("column '", names(fixedfx[i]), "' does not have any unique animals and will be removed from this analysis")
deletecols!(fixedfx,i)
end
end
@ -92,9 +88,7 @@ end
# If there are more groups than animals, then the analysis cannot continue
if sum(numgroups) >= numanimals
println("There are more contemporary groups than animals. The analysis will
now abort.")
exit()
throw(ErrorException("there are more contemporary groups than animals"))
end
# Define a "normal" animal as one of the last in the groups, provided that