From f985f4a700933ea4fb8698261277657950ce6065 Mon Sep 17 00:00:00 2001
From: "Thomas A. Christensen II" <25492070+MillironX@users.noreply.github.com>
Date: Fri, 18 Jun 2021 15:27:18 -0500
Subject: [PATCH] Remove verbose text output

---
 src/BeefBLUP.jl | 36 ------------------------------------
 1 file changed, 36 deletions(-)

diff --git a/src/BeefBLUP.jl b/src/BeefBLUP.jl
index 14aefa1..b06a5ae 100755
--- a/src/BeefBLUP.jl
+++ b/src/BeefBLUP.jl
@@ -18,12 +18,6 @@ using Gtk
 # Main entry-level function - acts just like the script
 function beefblup()
 
-# Display stuff
-println("beefblup v 0.2")
-println("(C) 2021 Thomas A. Christensen II")
-println("https://github.com/millironx/beefblup")
-print("\n")
-
 ### Prompt User
 # Ask for an input spreadsheet
 path = open_dialog_native(
@@ -62,17 +56,9 @@ end
 # Main worker function, can perform all the work if given all the user input
 function beefblup(path::String, savepath::String, h2::Float64)
 
-### Import input filename
-print("[🐮]: Importing data file...")
-
 # Import data from a suitable spreadsheet
 data = DataFrame(CSV.File(path))
 
-print("Done!\n")
-
-### Process input file
-print("[🐮]: Processing and formatting data...")
-
 # Sort the array by date
 sort!(data, :birthdate)
 
@@ -123,11 +109,6 @@ for i in 1:numtraits
     end
 end
 
-print("Done!\n")
-
-### Create the fixed-effect matrix
-print("[🐮]: Creating the fixed-effect matrix...")
-
 # Form the fixed-effect matrix
 X = zeros(Int8, numanimals, floor(Int,sum(numgroups))-length(numgroups)+1)
 X[:,1] = ones(Int8, 1, numanimals)
@@ -156,11 +137,6 @@ for i in 1:length(normal)
     end
 end
 
-print("Done!\n")
-
-### Additive relationship matrix
-print("[🐮]: Creating additive relationship matrix...")
-
 # Create an empty matrix for the additive relationship matrix
 A = zeros(numanimals, numanimals)
 
@@ -194,11 +170,6 @@ for i in 1:numanimals
     end
 end
 
-print("Done!\n")
-
-### Perform BLUP
-print("[🐮]: Solving the mixed-model equations...")
-
 # Extract the observed data
 Y = convert(Array{Float64}, data[:,end])
 
@@ -221,11 +192,6 @@ solutions = MME\MMY
 diaginv = diag(inv(MME))
 reliability = ones(Float64, length(diaginv)) - diaginv.*λ
 
-print("Done!\n")
-
-### Output the results
-print("[🐮]: Saving results...")
-
 # Find how many traits we found BLUE for
 numgroups = numgroups .- 1
 
@@ -300,8 +266,6 @@ end
 write(fileID, "\n - END REPORT -")
 close(fileID)
 
-print("Done!\n")
-
 
 end
 end