From 4beb475aeaa619941270366d77a3d5844e547fbb Mon Sep 17 00:00:00 2001 From: MillironX Date: Tue, 16 Jan 2024 01:38:11 +0000 Subject: [PATCH] =?UTF-8?q?[=E2=9A=A1=20AUTOMATED]:=20Pkg=20upgrade=20for?= =?UTF-8?q?=202024-01-16?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Files changed:\nM Manifest.toml --- Manifest.toml | 104 ++++++++++++++++++++++++++------------------------ 1 file changed, 54 insertions(+), 50 deletions(-) diff --git a/Manifest.toml b/Manifest.toml index b98e365..348498a 100644 --- a/Manifest.toml +++ b/Manifest.toml @@ -16,6 +16,12 @@ git-tree-sha1 = "faa260e4cb5aba097a73fab382dd4b5819d8ec8c" uuid = "1520ce14-60c1-5f80-bbc7-55ef81b5835c" version = "0.4.4" +[[Accessors]] +deps = ["CompositionsBase", "ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "MacroTools", "Requires", "Test"] +git-tree-sha1 = "cb96992f1bec110ad211b7e410e57ddf7944c16f" +uuid = "7d9f7c33-5ae7-4f3b-8dc6-eff91059b697" +version = "0.1.35" + [[Adapt]] deps = ["LinearAlgebra", "Requires"] git-tree-sha1 = "cde29ddf7e5726c9fb511f340244ea3481267608" @@ -57,9 +63,9 @@ version = "7.5.1" [[ArrayLayouts]] deps = ["FillArrays", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "b08a4043e1c14096ef8efe4dd97e07de5cacf240" +git-tree-sha1 = "a45ec4acc9d905f94b47243cff666820bb107789" uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a" -version = "1.4.5" +version = "1.5.2" [[Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" @@ -200,9 +206,9 @@ version = "0.9.23" [[Bzip2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "19a35467a82e236ff51bc17a3a44b69ef35185a2" +git-tree-sha1 = "9e2a6b69137e6969bab0152632dcb3bc108c8bdd" uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" -version = "1.0.8+0" +version = "1.0.8+1" [[CEnum]] git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90" @@ -253,9 +259,9 @@ version = "1.58.1" [[ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "2118cb2765f8197b08e5958cdd17c165427425ee" +git-tree-sha1 = "c1deebd76f7a443d527fc0430d5758b8b2112ed8" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.19.0" +version = "1.19.1" [[ChangesOfVariables]] deps = ["InverseFunctions", "LinearAlgebra", "Test"] @@ -364,15 +370,20 @@ uuid = "bbf7d656-a473-5ed7-a52c-81e309532950" version = "0.3.0" [[Compat]] -deps = ["Dates", "LinearAlgebra", "UUIDs"] -git-tree-sha1 = "886826d76ea9e72b35fcd000e535588f7b60f21d" +deps = ["Dates", "LinearAlgebra", "TOML", "UUIDs"] +git-tree-sha1 = "75bd5b6fc5089df449b5d35fa501c846c9b6549b" uuid = "34da2185-b29b-5c13-b0c7-acf172513d20" -version = "4.10.1" +version = "4.12.0" [[CompilerSupportLibraries_jll]] deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" +[[CompositionsBase]] +git-tree-sha1 = "802bb88cd69dfd1509f6670416bd4434015693ad" +uuid = "a33af91c-f02d-484b-be07-31d278c5ca2b" +version = "0.1.2" + [[ComputationalResources]] git-tree-sha1 = "52cb3ec90e8a8bea0e62e275ba577ad0f74821f7" uuid = "ed09eef8-17a6-5b46-8889-db040fac31e3" @@ -441,9 +452,9 @@ version = "1.6.1" [[DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] -git-tree-sha1 = "3dbd312d370723b6bb43ba9d02fc36abade4518d" +git-tree-sha1 = "ac67408d9ddf207de5cfa9a97e114352430f01ed" uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8" -version = "0.18.15" +version = "0.18.16" [[DataValueInterfaces]] git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" @@ -536,9 +547,9 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[Distributions]] deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "9242eec9b7e2e14f9952e8ea1c7e31a50501d587" +git-tree-sha1 = "7c302d7a5fec5214eb8a5a4c466dcf7a51fcf169" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.104" +version = "0.25.107" [[DocStringExtensions]] deps = ["LibGit2"] @@ -562,10 +573,9 @@ uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56" version = "1.0.4" [[EnzymeCore]] -deps = ["Adapt"] -git-tree-sha1 = "2efe862de93cd87f620ad6ac9c9e3f83f1b2841b" +git-tree-sha1 = "59c44d8fbc651c0395d8a6eda64b05ce316f58b4" uuid = "f151be2c-9106-41f4-ab19-57ee4f262869" -version = "0.6.4" +version = "0.6.5" [[EpollShim_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -651,9 +661,9 @@ version = "2.0.0" [[FileIO]] deps = ["Pkg", "Requires", "UUIDs"] -git-tree-sha1 = "299dc33549f68299137e51e6d49a13b5b1da9673" +git-tree-sha1 = "c5c28c245101bd59154f649e19b038d15901b5dc" uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" -version = "1.16.1" +version = "1.16.2" [[FilePathsBase]] deps = ["Compat", "Dates", "Mmap", "Printf", "Test", "UUIDs"] @@ -787,9 +797,9 @@ version = "0.5.3" [[GenomicAnnotations]] deps = ["BioGenerics", "BioSequences", "CodecZlib", "DataFrames", "TranscodingStreams"] -git-tree-sha1 = "268f710748354367e6a971cd644de800075e37dc" +git-tree-sha1 = "c8642dd097178b081853622be988c90c47e62712" uuid = "4f8a0a0a-376d-5ac0-ab14-e88793df67f0" -version = "0.3.3" +version = "0.3.6" [[GenomicFeatures]] deps = ["BioGenerics", "DataStructures", "IntervalTrees"] @@ -1122,9 +1132,9 @@ version = "0.5.0" [[JLD2]] deps = ["FileIO", "MacroTools", "Mmap", "OrderedCollections", "Pkg", "PrecompileTools", "Printf", "Reexport", "Requires", "TranscodingStreams", "UUIDs"] -git-tree-sha1 = "c2d0f45afcb5f6209155670bffd100c3b4937ea3" +git-tree-sha1 = "853b9e0b876e8c7093a824c4f83c619d23525e64" uuid = "033835bb-8acc-5ee8-8aae-3f567f8a3819" -version = "0.4.40" +version = "0.4.43" [[JLFzf]] deps = ["Pipe", "REPL", "Random", "fzf_jll"] @@ -1176,9 +1186,9 @@ version = "3.0.1+0" [[JuliaInterpreter]] deps = ["CodeTracking", "InteractiveUtils", "Random", "UUIDs"] -git-tree-sha1 = "e49bce680c109bc86e3e75ebcb15040d6ad9e1d3" +git-tree-sha1 = "04663b9e1eb0d0eabf76a6d0752e0dac83d53b36" uuid = "aa1ae85d-cabe-5617-a682-6adf51b2e16a" -version = "0.9.27" +version = "0.9.28" [[JuliaWebAPI]] deps = ["Base64", "HTTP", "JSON", "Serialization", "Sockets", "ZMQ"] @@ -1444,9 +1454,9 @@ version = "1.0.0" [[MacroTools]] deps = ["Markdown", "Random"] -git-tree-sha1 = "b211c553c199c111d998ecdaf7623d1b89b69f93" +git-tree-sha1 = "2fa9ee3e63fd3a4f7a9a4f4744a52f4856de82df" uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" -version = "0.5.12" +version = "0.5.13" [[MakieCore]] deps = ["Observables", "REPL"] @@ -1476,15 +1486,9 @@ uuid = "d6f4376e-aef5-505a-96c1-9c027394607a" [[MathOptInterface]] deps = ["BenchmarkTools", "CodecBzip2", "CodecZlib", "DataStructures", "ForwardDiff", "JSON", "LinearAlgebra", "MutableArithmetics", "NaNMath", "OrderedCollections", "PrecompileTools", "Printf", "SparseArrays", "SpecialFunctions", "Test", "Unicode"] -git-tree-sha1 = "362ae34a5291a79e16b8eb87b5738532c5e799ff" +git-tree-sha1 = "e2ae8cf5ac6daf5a3959f7f6ded9c2028b61d09d" uuid = "b8f27783-ece8-5eb3-8dc8-9495eed66fee" -version = "1.23.0" - -[[MathProgBase]] -deps = ["LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "9abbe463a1e9fc507f12a69e7f29346c2cdc472c" -uuid = "fdba3010-5040-5b88-9595-932c9decdf73" -version = "0.7.8" +version = "1.25.1" [[MbedTLS]] deps = ["Dates", "MbedTLS_jll", "MozillaCACerts_jll", "NetworkOptions", "Random", "Sockets"] @@ -1572,10 +1576,10 @@ uuid = "d41bc354-129a-5804-8e4c-c37616107c6c" version = "7.8.3" [[NLopt]] -deps = ["MathOptInterface", "MathProgBase", "NLopt_jll"] -git-tree-sha1 = "5a7e32c569200a8a03c3d55d286254b0321cd262" +deps = ["MathOptInterface", "NLopt_jll"] +git-tree-sha1 = "d1d09c342c3dd9b3bae985b088bd928632e4d79e" uuid = "76087f3c-5699-56af-9a33-bf431cd00edd" -version = "0.6.5" +version = "1.0.1" [[NLopt_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1927,9 +1931,9 @@ version = "1.9.0" [[ProtoBuf]] deps = ["BufferedStreams", "Dates", "EnumX", "TOML", "TranscodingStreams"] -git-tree-sha1 = "dc85dc33abde04b3c2f687834a5551994b27c328" +git-tree-sha1 = "f2bfddd629ba7a53ed789d6427d64e0e4c378ef8" uuid = "3349acd9-ac6a-5e09-bcdb-63829b23a429" -version = "1.0.14" +version = "1.0.15" [[QOI]] deps = ["ColorTypes", "FileIO", "FixedPointNumbers"] @@ -1945,15 +1949,15 @@ version = "5.15.3+2" [[QuadGK]] deps = ["DataStructures", "LinearAlgebra"] -git-tree-sha1 = "9ebcd48c498668c7fa0e97a9cae873fbee7bfee1" +git-tree-sha1 = "9b23c31e76e333e6fb4c1595ae6afa74966a729e" uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc" -version = "2.9.1" +version = "2.9.4" [[QuantEcon]] deps = ["DSP", "DataStructures", "Distributions", "FFTW", "Graphs", "LinearAlgebra", "Markdown", "NLopt", "Optim", "Pkg", "Primes", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "Test"] -git-tree-sha1 = "4f989614763519b089f4127063c1795d7a412753" +git-tree-sha1 = "034293b29fdbcae73aeb7ca0b2755e693f04701b" uuid = "fcd29c91-0bd7-5a09-975d-7ac3f643a60c" -version = "0.16.5" +version = "0.16.6" [[Quaternions]] deps = ["LinearAlgebra", "Random", "RealDot"] @@ -2064,10 +2068,10 @@ uuid = "f50d1b31-88e8-58de-be2c-1cc44531875f" version = "0.4.0+0" [[Roots]] -deps = ["ChainRulesCore", "CommonSolve", "Printf", "Setfield"] -git-tree-sha1 = "0f1d92463a020321983d04c110f476c274bafe2e" +deps = ["Accessors", "ChainRulesCore", "CommonSolve", "Printf"] +git-tree-sha1 = "af540898b1e6ca7aa6ba7213c05052809c6c522a" uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665" -version = "2.0.22" +version = "2.1.0" [[Rotations]] deps = ["LinearAlgebra", "Quaternions", "Random", "StaticArrays"] @@ -2259,9 +2263,9 @@ version = "1.5.0" [[StaticArrays]] deps = ["LinearAlgebra", "PrecompileTools", "Random", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "42d5373c10272d14ef49cc68ffc22df3b93c549a" +git-tree-sha1 = "f68dd04d131d9a8a8eb836173ee8f105c360b0c5" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.8.2" +version = "1.9.1" [[StaticArraysCore]] git-tree-sha1 = "36b3d696ce6366023a0ea192b4cd442268995a0d" @@ -2813,9 +2817,9 @@ version = "0.6.68" [[ZygoteRules]] deps = ["ChainRulesCore", "MacroTools"] -git-tree-sha1 = "9d749cd449fb448aeca4feee9a2f4186dbb5d184" +git-tree-sha1 = "27798139afc0a2afa7b1824c206d5e87ea587a00" uuid = "700de1a5-db45-46bc-99cf-38207098b444" -version = "0.2.4" +version = "0.2.5" [[fzf_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"]