mirror of
https://github.com/MillironX/docker-BioJulia.git
synced 2024-11-23 15:19:55 +00:00
[⚡ AUTOMATED]: Pkg upgrade for 2023-02-02
Files changed:\nM Manifest.toml
This commit is contained in:
parent
2ff4192976
commit
4edec83d48
1 changed files with 127 additions and 127 deletions
254
Manifest.toml
254
Manifest.toml
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@ -7,15 +7,15 @@ uuid = "621f4979-c628-5d54-868e-fcf4e3e8185c"
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version = "1.2.1"
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||||
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[[AbstractTrees]]
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git-tree-sha1 = "52b3b436f8f73133d7bc3a6c71ee7ed6ab2ab754"
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||||
git-tree-sha1 = "faa260e4cb5aba097a73fab382dd4b5819d8ec8c"
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||||
uuid = "1520ce14-60c1-5f80-bbc7-55ef81b5835c"
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version = "0.4.3"
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version = "0.4.4"
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[[Adapt]]
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deps = ["LinearAlgebra"]
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git-tree-sha1 = "195c5505521008abea5aee4f96930717958eac6f"
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||||
git-tree-sha1 = "0310e08cb19f5da31d08341c6120c047598f5b9c"
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||||
uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e"
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version = "3.4.0"
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version = "3.5.0"
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[[ArgParse]]
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deps = ["Logging", "TextWrap"]
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@ -45,16 +45,16 @@ uuid = "68821587-b530-5797-8361-c406ea357684"
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version = "3.5.0+3"
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[[ArrayInterface]]
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deps = ["ArrayInterfaceCore", "Compat", "IfElse", "LinearAlgebra", "Static"]
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git-tree-sha1 = "6d0918cb9c0d3db7fe56bea2bc8638fc4014ac35"
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deps = ["ArrayInterfaceCore", "Compat", "IfElse", "LinearAlgebra", "SnoopPrecompile", "Static"]
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git-tree-sha1 = "dedc16cbdd1d32bead4617d27572f582216ccf23"
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uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9"
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version = "6.0.24"
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version = "6.0.25"
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[[ArrayInterfaceCore]]
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deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"]
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git-tree-sha1 = "14c3f84a763848906ac681f94cf469a851601d92"
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deps = ["LinearAlgebra", "SnoopPrecompile", "SparseArrays", "SuiteSparse"]
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git-tree-sha1 = "e5f08b5689b1aad068e01751889f2f615c7db36d"
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uuid = "30b0a656-2188-435a-8636-2ec0e6a096e2"
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version = "0.1.28"
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version = "0.1.29"
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[[ArrayInterfaceGPUArrays]]
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deps = ["Adapt", "ArrayInterfaceCore", "GPUArraysCore", "LinearAlgebra"]
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@ -138,9 +138,9 @@ version = "0.3.1"
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[[BandedMatrices]]
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deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "SparseArrays"]
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git-tree-sha1 = "134fe629f08ca56f07b1d8028736dab437df34f5"
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git-tree-sha1 = "b277f5d9737fde7b5dce7f43faf49c80f542806c"
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uuid = "aae01518-5342-5314-be14-df237901396f"
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version = "0.17.9"
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version = "0.17.10"
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[[Base64]]
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uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f"
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@ -235,9 +235,9 @@ version = "0.4.2"
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[[CPUSummary]]
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deps = ["CpuId", "IfElse", "Static"]
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git-tree-sha1 = "5b735f654bdfd7b6c18c49f1d3ebff34b4b8af43"
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git-tree-sha1 = "2c144ddb46b552f72d7eafe7cc2f50746e41ea21"
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uuid = "2a0fbf3d-bb9c-48f3-b0a9-814d99fd7ab9"
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version = "0.2.1"
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version = "0.2.2"
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[[CSSUtil]]
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deps = ["Colors", "JSON", "Markdown", "Measures", "WebIO"]
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@ -277,15 +277,15 @@ version = "1.46.1"
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[[ChainRulesCore]]
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deps = ["Compat", "LinearAlgebra", "SparseArrays"]
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git-tree-sha1 = "e7ff6cadf743c098e08fca25c91103ee4303c9bb"
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git-tree-sha1 = "c6d890a52d2c4d55d326439580c3b8d0875a77d9"
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uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
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version = "1.15.6"
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version = "1.15.7"
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[[ChangesOfVariables]]
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deps = ["ChainRulesCore", "LinearAlgebra", "Test"]
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git-tree-sha1 = "38f7a08f19d8810338d4f5085211c7dfa5d5bdd8"
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git-tree-sha1 = "844b061c104c408b24537482469400af6075aae4"
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uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0"
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version = "0.1.4"
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version = "0.1.5"
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[[CloseOpenIntervals]]
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deps = ["ArrayInterface", "Static"]
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@ -331,9 +331,9 @@ version = "0.7.0"
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[[CodecZlib]]
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deps = ["TranscodingStreams", "Zlib_jll"]
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git-tree-sha1 = "ded953804d019afa9a3f98981d99b33e3db7b6da"
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git-tree-sha1 = "9c209fb7536406834aa938fb149964b985de6c83"
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uuid = "944b1d66-785c-5afd-91f1-9de20f533193"
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version = "0.7.0"
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version = "0.7.1"
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[[CodecZstd]]
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deps = ["CEnum", "TranscodingStreams", "Zstd_jll"]
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@ -494,9 +494,9 @@ version = "0.12.2"
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[[DelayDiffEq]]
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deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "LinearAlgebra", "Logging", "OrdinaryDiffEq", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "UnPack"]
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git-tree-sha1 = "478408ad9195fce93f2837a18519fbe7f7795b6d"
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git-tree-sha1 = "d94e9902cf38131d596a7644b8aa128cf172d9a1"
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uuid = "bcd4f6db-9728-5f36-b5f7-82caef46ccdb"
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version = "5.40.5"
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version = "5.40.6"
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[[DelimitedFiles]]
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deps = ["Mmap"]
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@ -509,10 +509,10 @@ uuid = "b429d917-457f-4dbc-8f4c-0cc954292b1d"
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version = "0.4.0"
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[[DiffEqBase]]
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deps = ["ArrayInterfaceCore", "ChainRulesCore", "DataStructures", "Distributions", "DocStringExtensions", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "MuladdMacro", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "Setfield", "SimpleNonlinearSolve", "SparseArrays", "Static", "StaticArrays", "Statistics", "Tricks", "ZygoteRules"]
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git-tree-sha1 = "b410f0b8a52752e1c1723b4316382203f914672c"
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deps = ["ArrayInterfaceCore", "ChainRulesCore", "DataStructures", "Distributions", "DocStringExtensions", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "MuladdMacro", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "Static", "StaticArrays", "Statistics", "Tricks", "ZygoteRules"]
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git-tree-sha1 = "1e0a1fde551d043af93996a52430c762b32d30c4"
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uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
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version = "6.113.1"
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version = "6.114.2"
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[[DiffEqCallbacks]]
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deps = ["DataStructures", "DiffEqBase", "ForwardDiff", "LinearAlgebra", "Markdown", "NLsolve", "Parameters", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArrays"]
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@ -680,9 +680,9 @@ uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee"
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[[FillArrays]]
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deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"]
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git-tree-sha1 = "9a0472ec2f5409db243160a8b030f94c380167a3"
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git-tree-sha1 = "d3ba08ab64bdfd27234d3f61956c966266757fe6"
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uuid = "1a297f60-69ca-5386-bcde-b61e274b549b"
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version = "0.13.6"
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version = "0.13.7"
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[[FiniteDiff]]
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deps = ["ArrayInterfaceCore", "LinearAlgebra", "Requires", "Setfield", "SparseArrays", "StaticArrays"]
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@ -760,10 +760,10 @@ uuid = "0656b61e-2033-5cc2-a64a-77c0f6c09b89"
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version = "3.3.8+0"
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[[GLM]]
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deps = ["Distributions", "LinearAlgebra", "Printf", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "StatsModels"]
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git-tree-sha1 = "039118892476c2bf045a43b88fcb75ed566000ff"
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deps = ["Distributions", "LinearAlgebra", "Printf", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "StatsModels"]
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git-tree-sha1 = "884477b9886a52a84378275737e2823a5c98e349"
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uuid = "38e38edf-8417-5370-95a0-9cbb8c7f171a"
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version = "1.8.0"
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version = "1.8.1"
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[[GMP_jll]]
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deps = ["Artifacts", "Libdl"]
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@ -771,27 +771,27 @@ uuid = "781609d7-10c4-51f6-84f2-b8444358ff6d"
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[[GPUArrays]]
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deps = ["Adapt", "GPUArraysCore", "LLVM", "LinearAlgebra", "Printf", "Random", "Reexport", "Serialization", "Statistics"]
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git-tree-sha1 = "45d7deaf05cbb44116ba785d147c518ab46352d7"
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git-tree-sha1 = "4dfaff044eb2ce11a897fecd85538310e60b91e6"
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uuid = "0c68f7d7-f131-5f86-a1c3-88cf8149b2d7"
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version = "8.5.0"
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version = "8.6.2"
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[[GPUArraysCore]]
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deps = ["Adapt"]
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git-tree-sha1 = "6872f5ec8fd1a38880f027a26739d42dcda6691f"
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git-tree-sha1 = "57f7cde02d7a53c9d1d28443b9f11ac5fbe7ebc9"
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uuid = "46192b85-c4d5-4398-a991-12ede77f4527"
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version = "0.1.2"
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version = "0.1.3"
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[[GR]]
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deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "UUIDs", "p7zip_jll"]
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git-tree-sha1 = "387d2b8b3ca57b791633f0993b31d8cb43ea3292"
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git-tree-sha1 = "9e23bd6bb3eb4300cb567bdf63e2c14e5d2ffdbc"
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uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71"
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version = "0.71.3"
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version = "0.71.5"
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[[GR_jll]]
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deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Pkg", "Qt5Base_jll", "Zlib_jll", "libpng_jll"]
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git-tree-sha1 = "5982b5e20f97bff955e9a2343a14da96a746cd8c"
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git-tree-sha1 = "aa23c9f9b7c0ba6baeabe966ea1c7d2c7487ef90"
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uuid = "d2c73de3-f751-5644-a686-071e5b155ba9"
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version = "0.71.3+0"
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version = "0.71.5+0"
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[[GenericSchur]]
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deps = ["LinearAlgebra", "Printf"]
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@ -884,9 +884,9 @@ version = "0.5.2"
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[[HostCPUFeatures]]
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deps = ["BitTwiddlingConvenienceFunctions", "IfElse", "Libdl", "Static"]
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git-tree-sha1 = "f64b890b2efa4de81520d2b0fbdc9aadb65bdf53"
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git-tree-sha1 = "734fd90dd2f920a2f1921d5388dcebe805b262dc"
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uuid = "3e5b6fbb-0976-4d2c-9146-d79de83f2fb0"
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version = "0.1.13"
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version = "0.1.14"
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[[HypergeometricFunctions]]
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deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions", "Test"]
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@ -1036,9 +1036,9 @@ version = "0.5.1"
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[[InlineStrings]]
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deps = ["Parsers"]
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git-tree-sha1 = "0cf92ec945125946352f3d46c96976ab972bde6f"
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git-tree-sha1 = "9cc2baf75c6d09f9da536ddf58eb2f29dedaf461"
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uuid = "842dd82b-1e85-43dc-bf29-5d0ee9dffc48"
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version = "1.3.2"
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version = "1.4.0"
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[[IntegerMathUtils]]
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git-tree-sha1 = "f366daebdfb079fd1fe4e3d560f99a0c892e15bc"
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@ -1131,9 +1131,9 @@ version = "0.5.0"
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[[JLD2]]
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deps = ["FileIO", "MacroTools", "Mmap", "OrderedCollections", "Pkg", "Printf", "Reexport", "TranscodingStreams", "UUIDs"]
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git-tree-sha1 = "ec8a9c9f0ecb1c687e34c1fda2699de4d054672a"
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git-tree-sha1 = "c3244ef42b7d4508c638339df1bdbf4353e144db"
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uuid = "033835bb-8acc-5ee8-8aae-3f567f8a3819"
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version = "0.4.29"
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version = "0.4.30"
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[[JLFzf]]
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deps = ["Pipe", "REPL", "Random", "fzf_jll"]
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@ -1251,9 +1251,9 @@ version = "3.0.0+1"
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[[LLVM]]
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deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"]
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git-tree-sha1 = "088dd02b2797f0233d92583562ab669de8517fd1"
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git-tree-sha1 = "b8ae281340f0d3e973aae7b96fb7502b0119b376"
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uuid = "929cbde3-209d-540e-8aea-75f648917ca0"
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version = "4.14.1"
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version = "4.15.0"
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[[LLVMExtra_jll]]
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deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg", "TOML"]
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@ -1280,9 +1280,9 @@ version = "0.15.18"
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[[LayoutPointers]]
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deps = ["ArrayInterface", "ArrayInterfaceOffsetArrays", "ArrayInterfaceStaticArrays", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static"]
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git-tree-sha1 = "7e34177793212f6d64d045ee47d2883f09fffacc"
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git-tree-sha1 = "0ad6f0c51ce004dadc24a28a0dfecfb568e52242"
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uuid = "10f19ff3-798f-405d-979b-55457f8fc047"
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version = "0.1.12"
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version = "0.1.13"
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[[LazyArtifacts]]
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deps = ["Artifacts", "Pkg"]
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@ -1396,9 +1396,9 @@ uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
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[[LinearSolve]]
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deps = ["ArrayInterfaceCore", "DocStringExtensions", "FastLapackInterface", "GPUArraysCore", "IterativeSolvers", "KLU", "Krylov", "KrylovKit", "LinearAlgebra", "Preferences", "RecursiveFactorization", "Reexport", "SciMLBase", "Setfield", "SnoopPrecompile", "SparseArrays", "Sparspak", "SuiteSparse", "UnPack"]
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git-tree-sha1 = "cf1227e369513687658476e466a5b73a7c3dfa1f"
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git-tree-sha1 = "960da8a80f9882fb52a5a199e944d3b86f0d2b94"
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uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae"
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version = "1.33.0"
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version = "1.34.1"
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[[LittleCMS_jll]]
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deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pkg"]
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@ -1408,18 +1408,18 @@ version = "2.12.0+0"
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[[LogExpFunctions]]
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deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"]
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git-tree-sha1 = "946607f84feb96220f480e0422d3484c49c00239"
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git-tree-sha1 = "45b288af6956e67e621c5cbb2d75a261ab58300b"
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uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688"
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version = "0.3.19"
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version = "0.3.20"
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[[Logging]]
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uuid = "56ddb016-857b-54e1-b83d-db4d58db5568"
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[[LoopVectorization]]
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deps = ["ArrayInterface", "ArrayInterfaceCore", "ArrayInterfaceOffsetArrays", "ArrayInterfaceStaticArrays", "CPUSummary", "ChainRulesCore", "CloseOpenIntervals", "DocStringExtensions", "ForwardDiff", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "SIMDDualNumbers", "SIMDTypes", "SLEEFPirates", "SnoopPrecompile", "SpecialFunctions", "Static", "ThreadingUtilities", "UnPack", "VectorizationBase"]
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git-tree-sha1 = "155132d68bc33c826dbdeb452c5d0a79e2d0e586"
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git-tree-sha1 = "f127dff5c29692069c8ada8267864d252d417821"
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uuid = "bdcacae8-1622-11e9-2a5c-532679323890"
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version = "0.12.146"
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version = "0.12.149"
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[[Lz4_jll]]
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deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
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@ -1463,19 +1463,19 @@ version = "0.4.1"
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[[MarchingCubes]]
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deps = ["SnoopPrecompile", "StaticArrays"]
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git-tree-sha1 = "ffc66942498a5f0d02b9e7b1b1af0f5873142cdc"
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git-tree-sha1 = "55aaf3fdf414b691a15875cfe5edb6e0daf4625a"
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uuid = "299715c1-40a9-479a-aaf9-4a633d36f717"
|
||||
version = "0.1.4"
|
||||
version = "0.1.6"
|
||||
|
||||
[[Markdown]]
|
||||
deps = ["Base64"]
|
||||
uuid = "d6f4376e-aef5-505a-96c1-9c027394607a"
|
||||
|
||||
[[MathOptInterface]]
|
||||
deps = ["BenchmarkTools", "CodecBzip2", "CodecZlib", "DataStructures", "ForwardDiff", "JSON", "LinearAlgebra", "MutableArithmetics", "NaNMath", "OrderedCollections", "Printf", "SparseArrays", "SpecialFunctions", "Test", "Unicode"]
|
||||
git-tree-sha1 = "baa31c7b235492d9a6f2cb31bb533d74345b0614"
|
||||
deps = ["BenchmarkTools", "CodecBzip2", "CodecZlib", "DataStructures", "ForwardDiff", "JSON", "LinearAlgebra", "MutableArithmetics", "NaNMath", "OrderedCollections", "Printf", "SnoopPrecompile", "SparseArrays", "SpecialFunctions", "Test", "Unicode"]
|
||||
git-tree-sha1 = "b577d6c6b484f35fc27c1e767dc32458815da0e5"
|
||||
uuid = "b8f27783-ece8-5eb3-8dc8-9495eed66fee"
|
||||
version = "1.11.4"
|
||||
version = "1.11.5"
|
||||
|
||||
[[MathProgBase]]
|
||||
deps = ["LinearAlgebra", "SparseArrays"]
|
||||
|
@ -1540,10 +1540,10 @@ uuid = "f8716d33-7c4a-5097-896f-ce0ecbd3ef6b"
|
|||
version = "0.5.1"
|
||||
|
||||
[[MultivariateStats]]
|
||||
deps = ["Arpack", "LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI", "StatsBase"]
|
||||
git-tree-sha1 = "7008a3412d823e29d370ddc77411d593bd8a3d03"
|
||||
deps = ["Arpack", "LinearAlgebra", "SparseArrays", "Statistics", "StatsBase"]
|
||||
git-tree-sha1 = "6d019f5a0465522bbfdd68ecfad7f86b535d6935"
|
||||
uuid = "6f286f6a-111f-5878-ab1e-185364afe411"
|
||||
version = "0.9.1"
|
||||
version = "0.9.0"
|
||||
|
||||
[[Mustache]]
|
||||
deps = ["Printf", "Tables"]
|
||||
|
@ -1627,9 +1627,9 @@ uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908"
|
|||
|
||||
[[NonlinearSolve]]
|
||||
deps = ["ArrayInterfaceCore", "DiffEqBase", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "LinearSolve", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SnoopPrecompile", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"]
|
||||
git-tree-sha1 = "7142ca5ab9bd7452cafb29f7d51f574a09d69052"
|
||||
git-tree-sha1 = "e2b063236a3103a3640ff1f2e3945ca387281cbe"
|
||||
uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec"
|
||||
version = "1.1.1"
|
||||
version = "1.3.0"
|
||||
|
||||
[[Observables]]
|
||||
git-tree-sha1 = "6862738f9796b3edc1c09d0890afce4eca9e7e93"
|
||||
|
@ -1638,9 +1638,9 @@ version = "0.5.4"
|
|||
|
||||
[[OffsetArrays]]
|
||||
deps = ["Adapt"]
|
||||
git-tree-sha1 = "f71d8950b724e9ff6110fc948dff5a329f901d64"
|
||||
git-tree-sha1 = "82d7c9e310fe55aa54996e6f7f94674e2a38fcb4"
|
||||
uuid = "6fe1bfb0-de20-5000-8ca7-80f57d26f881"
|
||||
version = "1.12.8"
|
||||
version = "1.12.9"
|
||||
|
||||
[[Ogg_jll]]
|
||||
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
|
||||
|
@ -1717,9 +1717,9 @@ version = "1.4.1"
|
|||
|
||||
[[OrdinaryDiffEq]]
|
||||
deps = ["Adapt", "ArrayInterface", "ArrayInterfaceCore", "ArrayInterfaceGPUArrays", "ArrayInterfaceStaticArrays", "ArrayInterfaceStaticArraysCore", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLNLSolve", "SimpleNonlinearSolve", "SnoopPrecompile", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"]
|
||||
git-tree-sha1 = "ca0c8939dbd3617ae3fdca13374d0b7501a2dd28"
|
||||
git-tree-sha1 = "f1f22e8a603a188ca76ae39a5f6caf560bd3d024"
|
||||
uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed"
|
||||
version = "6.37.0"
|
||||
version = "6.41.0"
|
||||
|
||||
[[PCRE2_jll]]
|
||||
deps = ["Artifacts", "Libdl"]
|
||||
|
@ -1802,15 +1802,15 @@ version = "3.1.0"
|
|||
|
||||
[[PlotUtils]]
|
||||
deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "SnoopPrecompile", "Statistics"]
|
||||
git-tree-sha1 = "5b7690dd212e026bbab1860016a6601cb077ab66"
|
||||
git-tree-sha1 = "c95373e73290cf50a8a22c3375e4625ded5c5280"
|
||||
uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043"
|
||||
version = "1.3.2"
|
||||
version = "1.3.4"
|
||||
|
||||
[[Plots]]
|
||||
deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SnoopPrecompile", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"]
|
||||
git-tree-sha1 = "a99bbd3664bb12a775cda2eba7f3b2facf3dad94"
|
||||
git-tree-sha1 = "0a3a23e0c67adf9433111467b0522077c596de58"
|
||||
uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
|
||||
version = "1.38.2"
|
||||
version = "1.38.3"
|
||||
|
||||
[[PoissonRandom]]
|
||||
deps = ["Random"]
|
||||
|
@ -1820,21 +1820,21 @@ version = "0.4.3"
|
|||
|
||||
[[Polyester]]
|
||||
deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StrideArraysCore", "ThreadingUtilities"]
|
||||
git-tree-sha1 = "7f8dd47630b265df9e1d117137ee1894b195e032"
|
||||
git-tree-sha1 = "e8e0fabcff4df8686c4267503887202a783d498e"
|
||||
uuid = "f517fe37-dbe3-4b94-8317-1923a5111588"
|
||||
version = "0.7.1"
|
||||
version = "0.7.2"
|
||||
|
||||
[[PolyesterWeave]]
|
||||
deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"]
|
||||
git-tree-sha1 = "5d0a598c95f67ee0787723e38745cb954d143684"
|
||||
git-tree-sha1 = "240d7170f5ffdb285f9427b92333c3463bf65bf6"
|
||||
uuid = "1d0040c9-8b98-4ee7-8388-3f51789ca0ad"
|
||||
version = "0.2.0"
|
||||
version = "0.2.1"
|
||||
|
||||
[[Polynomials]]
|
||||
deps = ["LinearAlgebra", "RecipesBase"]
|
||||
git-tree-sha1 = "432e9736a222c2ee96432075774187b90f300524"
|
||||
git-tree-sha1 = "c687954bd0b4b0508249fd36999f1b82456c2a10"
|
||||
uuid = "f27b6e38-b328-58d1-80ce-0feddd5e7a45"
|
||||
version = "3.2.2"
|
||||
version = "3.2.3"
|
||||
|
||||
[[PooledArrays]]
|
||||
deps = ["DataAPI", "Future"]
|
||||
|
@ -1844,9 +1844,9 @@ version = "1.4.2"
|
|||
|
||||
[[PopGen]]
|
||||
deps = ["Clustering", "DataFrames", "Distances", "Distributions", "MultipleTesting", "MultivariateStats", "NamedArrays", "OnlineStats", "PooledArrays", "PopGenCore", "Random", "Reexport", "StatsBase", "TSne", "Term"]
|
||||
git-tree-sha1 = "fefba180135f55d6568702ee2605756ed6b16d4c"
|
||||
git-tree-sha1 = "5ae136673280da008bcf55e551553a254fd463ca"
|
||||
uuid = "af524d12-c74b-11e9-22a8-3b091653023f"
|
||||
version = "0.9.0"
|
||||
version = "0.9.4"
|
||||
|
||||
[[PopGenCore]]
|
||||
deps = ["CSV", "CodecZlib", "DataFrames", "PooledArrays", "Random", "StaticArrays", "StatsBase", "VariantCallFormat"]
|
||||
|
@ -1930,9 +1930,9 @@ version = "5.15.3+2"
|
|||
|
||||
[[QuadGK]]
|
||||
deps = ["DataStructures", "LinearAlgebra"]
|
||||
git-tree-sha1 = "97aa253e65b784fd13e83774cadc95b38011d734"
|
||||
git-tree-sha1 = "de191bc385072cc6c7ed3ffdc1caeed3f22c74d4"
|
||||
uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc"
|
||||
version = "2.6.0"
|
||||
version = "2.7.0"
|
||||
|
||||
[[QuantEcon]]
|
||||
deps = ["DSP", "DataStructures", "Distributions", "FFTW", "Graphs", "LinearAlgebra", "Markdown", "NLopt", "Optim", "Pkg", "Primes", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "Test"]
|
||||
|
@ -1997,15 +1997,15 @@ version = "0.6.11"
|
|||
|
||||
[[RecursiveArrayTools]]
|
||||
deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArraysCore", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "ZygoteRules"]
|
||||
git-tree-sha1 = "fcf0962b399f3bc0fa13ae7274db7879c3ef9f1e"
|
||||
git-tree-sha1 = "f311e004143b4dc7c5492a2e9b9a1d945058fd8c"
|
||||
uuid = "731186ca-8d62-57ce-b412-fbd966d074cd"
|
||||
version = "2.35.0"
|
||||
version = "2.36.0"
|
||||
|
||||
[[RecursiveFactorization]]
|
||||
deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "SnoopPrecompile", "StrideArraysCore", "TriangularSolve"]
|
||||
git-tree-sha1 = "664aba1c5259821356f2ef771eabc502d67a8f0d"
|
||||
git-tree-sha1 = "315b2c85818eea6ad1b6b84fd4ecb40cd4146665"
|
||||
uuid = "f2c3362d-daeb-58d1-803e-2bc74f2840b4"
|
||||
version = "0.2.16"
|
||||
version = "0.2.17"
|
||||
|
||||
[[Reexport]]
|
||||
git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b"
|
||||
|
@ -2038,15 +2038,15 @@ version = "1.1.1"
|
|||
|
||||
[[Rmath]]
|
||||
deps = ["Random", "Rmath_jll"]
|
||||
git-tree-sha1 = "bf3188feca147ce108c76ad82c2792c57abe7b1f"
|
||||
git-tree-sha1 = "f65dcb5fa46aee0cf9ed6274ccbd597adc49aa7b"
|
||||
uuid = "79098fc4-a85e-5d69-aa6a-4863f24498fa"
|
||||
version = "0.7.0"
|
||||
version = "0.7.1"
|
||||
|
||||
[[Rmath_jll]]
|
||||
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
|
||||
git-tree-sha1 = "68db32dff12bb6127bac73c209881191bf0efbb7"
|
||||
git-tree-sha1 = "6ed52fdd3382cf21947b15e8870ac0ddbff736da"
|
||||
uuid = "f50d1b31-88e8-58de-be2c-1cc44531875f"
|
||||
version = "0.3.0+0"
|
||||
version = "0.4.0+0"
|
||||
|
||||
[[Roots]]
|
||||
deps = ["ChainRulesCore", "CommonSolve", "Printf", "Setfield"]
|
||||
|
@ -2088,9 +2088,9 @@ version = "0.1.0"
|
|||
|
||||
[[SLEEFPirates]]
|
||||
deps = ["IfElse", "Static", "VectorizationBase"]
|
||||
git-tree-sha1 = "c8679919df2d3c71f74451321f1efea6433536cc"
|
||||
git-tree-sha1 = "cda0aece8080e992f6370491b08ef3909d1c04e7"
|
||||
uuid = "476501e8-09a2-5ece-8869-fb82de89a1fa"
|
||||
version = "0.6.37"
|
||||
version = "0.6.38"
|
||||
|
||||
[[ScanByte]]
|
||||
deps = ["Libdl", "SIMD"]
|
||||
|
@ -2099,16 +2099,16 @@ uuid = "7b38b023-a4d7-4c5e-8d43-3f3097f304eb"
|
|||
version = "0.3.3"
|
||||
|
||||
[[SciMLBase]]
|
||||
deps = ["ArrayInterfaceCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Preferences", "RecipesBase", "RecursiveArrayTools", "RuntimeGeneratedFunctions", "StaticArraysCore", "Statistics", "Tables"]
|
||||
git-tree-sha1 = "fe89a8113ea445bcff9ee570077830674babb534"
|
||||
deps = ["ArrayInterfaceCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Preferences", "RecipesBase", "RecursiveArrayTools", "RuntimeGeneratedFunctions", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"]
|
||||
git-tree-sha1 = "c4e3c4bb8544b2f0bc537baa44925b6b39a8c383"
|
||||
uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
|
||||
version = "1.81.0"
|
||||
version = "1.81.1"
|
||||
|
||||
[[SciMLNLSolve]]
|
||||
deps = ["LineSearches", "NLsolve", "Reexport", "SciMLBase"]
|
||||
git-tree-sha1 = "b35d1f5d8afeee44e24915bb767e34fae867502f"
|
||||
deps = ["DiffEqBase", "LineSearches", "NLsolve", "Reexport", "SciMLBase"]
|
||||
git-tree-sha1 = "66c7f901dbcad51791136e2d90ee67240256ecde"
|
||||
uuid = "e9a6253c-8580-4d32-9898-8661bb511710"
|
||||
version = "0.1.1"
|
||||
version = "0.1.3"
|
||||
|
||||
[[ScikitLearnBase]]
|
||||
deps = ["LinearAlgebra", "Random", "Statistics"]
|
||||
|
@ -2130,9 +2130,9 @@ version = "1.3.17"
|
|||
|
||||
[[SequenceVariation]]
|
||||
deps = ["BioAlignments", "BioGenerics", "BioSequences", "BioSymbols"]
|
||||
git-tree-sha1 = "a3a9e20e02fe59fd00964fa07e5a1bb23630f569"
|
||||
git-tree-sha1 = "ce0d08be783a6dae62c328a5c35e7c08d65adaf2"
|
||||
uuid = "eef6e190-9969-4f06-a38f-35a110a8fdc8"
|
||||
version = "0.2.1"
|
||||
version = "0.2.2"
|
||||
|
||||
[[Serialization]]
|
||||
uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b"
|
||||
|
@ -2159,10 +2159,10 @@ uuid = "992d4aef-0814-514b-bc4d-f2e9a6c4116f"
|
|||
version = "1.0.3"
|
||||
|
||||
[[SimpleNonlinearSolve]]
|
||||
deps = ["ArrayInterfaceCore", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "Reexport", "SciMLBase", "SnoopPrecompile", "StaticArraysCore"]
|
||||
git-tree-sha1 = "61b8ffdb22453132e02a10c5638dfb42834c776b"
|
||||
deps = ["ArrayInterfaceCore", "DiffEqBase", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "Reexport", "SciMLBase", "SnoopPrecompile", "StaticArraysCore"]
|
||||
git-tree-sha1 = "9b941eeecd4f051f5656383fbebe7f7d0a89fc0d"
|
||||
uuid = "727e6d20-b764-4bd8-a329-72de5adea6c7"
|
||||
version = "0.1.5"
|
||||
version = "0.1.9"
|
||||
|
||||
[[SimpleTraits]]
|
||||
deps = ["InteractiveUtils", "MacroTools"]
|
||||
|
@ -2172,9 +2172,9 @@ version = "0.9.4"
|
|||
|
||||
[[SimpleWeightedGraphs]]
|
||||
deps = ["Graphs", "LinearAlgebra", "Markdown", "SparseArrays", "Test"]
|
||||
git-tree-sha1 = "a6f404cc44d3d3b28c793ec0eb59af709d827e4e"
|
||||
git-tree-sha1 = "a8d28ad975506694d59ac2f351e29243065c5c52"
|
||||
uuid = "47aef6b3-ad0c-573a-a1e2-d07658019622"
|
||||
version = "1.2.1"
|
||||
version = "1.2.2"
|
||||
|
||||
[[Sixel]]
|
||||
deps = ["Dates", "FileIO", "ImageCore", "IndirectArrays", "OffsetArrays", "REPL", "libsixel_jll"]
|
||||
|
@ -2209,9 +2209,9 @@ version = "1.30.0"
|
|||
|
||||
[[Sparspak]]
|
||||
deps = ["Libdl", "LinearAlgebra", "Logging", "OffsetArrays", "Printf", "SparseArrays", "Test"]
|
||||
git-tree-sha1 = "4149bb50ccf65bc9c9d55e7001ca7aa4a7649603"
|
||||
git-tree-sha1 = "f9ca0222e4c0b7b1520298a0880e2f7101938831"
|
||||
uuid = "e56a9233-b9d6-4f03-8d0f-1825330902ac"
|
||||
version = "0.3.4"
|
||||
version = "0.3.7"
|
||||
|
||||
[[SpecialFunctions]]
|
||||
deps = ["ChainRulesCore", "IrrationalConstants", "LogExpFunctions", "OpenLibm_jll", "OpenSpecFun_jll"]
|
||||
|
@ -2248,9 +2248,9 @@ uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
|
|||
|
||||
[[StatsAPI]]
|
||||
deps = ["LinearAlgebra"]
|
||||
git-tree-sha1 = "8d7530a38dbd2c397be7ddd01a424e4f411dcc41"
|
||||
git-tree-sha1 = "f9af7f195fb13589dd2e2d57fdb401717d2eb1f6"
|
||||
uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0"
|
||||
version = "1.2.2"
|
||||
version = "1.5.0"
|
||||
|
||||
[[StatsBase]]
|
||||
deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"]
|
||||
|
@ -2296,15 +2296,15 @@ version = "1.0.1"
|
|||
|
||||
[[StrideArraysCore]]
|
||||
deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "ThreadingUtilities"]
|
||||
git-tree-sha1 = "70b6ee0e5cc1745a28dd9ba040b8e5ee28fffc69"
|
||||
git-tree-sha1 = "45190b743cdc6f761da1e079bb15ff103a89069c"
|
||||
uuid = "7792a7ef-975c-4747-a70f-980b88e8d1da"
|
||||
version = "0.4.5"
|
||||
version = "0.4.6"
|
||||
|
||||
[[StringEncodings]]
|
||||
deps = ["Libiconv_jll"]
|
||||
git-tree-sha1 = "50ccd5ddb00d19392577902f0079267a72c5ab04"
|
||||
git-tree-sha1 = "33c0da881af3248dafefb939a21694b97cfece76"
|
||||
uuid = "69024149-9ee7-55f6-a4c4-859efe599b68"
|
||||
version = "0.3.5"
|
||||
version = "0.3.6"
|
||||
|
||||
[[StringManipulation]]
|
||||
git-tree-sha1 = "46da2434b41f41ac3594ee9816ce5541c6096123"
|
||||
|
@ -2344,9 +2344,9 @@ uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c"
|
|||
|
||||
[[Sundials]]
|
||||
deps = ["CEnum", "DataStructures", "DiffEqBase", "Libdl", "LinearAlgebra", "Logging", "Reexport", "SciMLBase", "SnoopPrecompile", "SparseArrays", "Sundials_jll"]
|
||||
git-tree-sha1 = "016f524e060573d77bb8d60cbbb3ffbc7205804b"
|
||||
git-tree-sha1 = "3b96c84832be31fce33de760a2cd5f4fdc050c23"
|
||||
uuid = "c3572dad-4567-51f8-b174-8c6c989267f4"
|
||||
version = "4.12.0"
|
||||
version = "4.13.0"
|
||||
|
||||
[[Sundials_jll]]
|
||||
deps = ["CompilerSupportLibraries_jll", "Libdl", "OpenBLAS_jll", "Pkg", "SuiteSparse_jll"]
|
||||
|
@ -2399,10 +2399,10 @@ uuid = "62fd8b95-f654-4bbd-a8a5-9c27f68ccd50"
|
|||
version = "0.1.1"
|
||||
|
||||
[[Term]]
|
||||
deps = ["CodeTracking", "Dates", "Highlights", "InteractiveUtils", "Logging", "Markdown", "MyterialColors", "OrderedCollections", "Parameters", "ProgressLogging", "SnoopPrecompile", "Tables", "UUIDs", "Unicode", "UnicodeFun", "WordTokenizers"]
|
||||
git-tree-sha1 = "50d3093ef60cdbfabf8e10fc028b1a436717932b"
|
||||
deps = ["CodeTracking", "Dates", "Highlights", "InteractiveUtils", "Logging", "Markdown", "MyterialColors", "OrderedCollections", "Parameters", "ProgressLogging", "Tables", "UUIDs", "Unicode", "UnicodeFun", "WordTokenizers"]
|
||||
git-tree-sha1 = "af539c0921d43b8cf24422324a4443ff9cbc1601"
|
||||
uuid = "22787eb5-b846-44ae-b979-8e399b8463ab"
|
||||
version = "1.1.0"
|
||||
version = "1.2.0"
|
||||
|
||||
[[Test]]
|
||||
deps = ["InteractiveUtils", "Logging", "Random", "Serialization"]
|
||||
|
@ -2415,9 +2415,9 @@ version = "1.0.1"
|
|||
|
||||
[[ThreadingUtilities]]
|
||||
deps = ["ManualMemory"]
|
||||
git-tree-sha1 = "f8629df51cab659d70d2e5618a430b4d3f37f2c3"
|
||||
git-tree-sha1 = "c97f60dd4f2331e1a495527f80d242501d2f9865"
|
||||
uuid = "8290d209-cae3-49c0-8002-c8c24d57dab5"
|
||||
version = "0.5.0"
|
||||
version = "0.5.1"
|
||||
|
||||
[[TiffImages]]
|
||||
deps = ["ColorTypes", "DataStructures", "DocStringExtensions", "FileIO", "FixedPointNumbers", "IndirectArrays", "Inflate", "Mmap", "OffsetArrays", "PkgVersion", "ProgressMeter", "UUIDs"]
|
||||
|
@ -2450,10 +2450,10 @@ uuid = "a2a6695c-b41b-5b7d-aed9-dbfdeacea5d7"
|
|||
version = "0.3.0"
|
||||
|
||||
[[TriangularSolve]]
|
||||
deps = ["CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "LoopVectorization", "Polyester", "SnoopPrecompile", "Static", "VectorizationBase"]
|
||||
git-tree-sha1 = "6cca884e0fe17916da63c62dc1bf5896ce5d723e"
|
||||
deps = ["CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "LoopVectorization", "Polyester", "Static", "VectorizationBase"]
|
||||
git-tree-sha1 = "31eedbc0b6d07c08a700e26d31298ac27ef330eb"
|
||||
uuid = "d5829a12-d9aa-46ab-831f-fb7c9ab06edf"
|
||||
version = "0.1.17"
|
||||
version = "0.1.19"
|
||||
|
||||
[[Tricks]]
|
||||
git-tree-sha1 = "6bac775f2d42a611cdfcd1fb217ee719630c4175"
|
||||
|
@ -2519,9 +2519,9 @@ version = "0.5.3"
|
|||
|
||||
[[VectorizationBase]]
|
||||
deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static"]
|
||||
git-tree-sha1 = "6b1dc4fc039d273abc247eba675ac1299380e5d9"
|
||||
git-tree-sha1 = "4c59c2df8d2676c4691a39fa70495a6db0c5d290"
|
||||
uuid = "3d5dd08c-fd9d-11e8-17fa-ed2836048c2f"
|
||||
version = "0.21.57"
|
||||
version = "0.21.58"
|
||||
|
||||
[[VertexSafeGraphs]]
|
||||
deps = ["Graphs"]
|
||||
|
@ -2774,9 +2774,9 @@ version = "1.5.2+0"
|
|||
|
||||
[[Zygote]]
|
||||
deps = ["AbstractFFTs", "ChainRules", "ChainRulesCore", "DiffRules", "Distributed", "FillArrays", "ForwardDiff", "GPUArrays", "GPUArraysCore", "IRTools", "InteractiveUtils", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "Random", "Requires", "SparseArrays", "SpecialFunctions", "Statistics", "ZygoteRules"]
|
||||
git-tree-sha1 = "e76246c67099856cc9a85a3a809a57980eef2eae"
|
||||
git-tree-sha1 = "e1af683167eea952684188f5e1e29b9cabc2e5f9"
|
||||
uuid = "e88e6eb3-aa80-5325-afca-941959d7151f"
|
||||
version = "0.6.54"
|
||||
version = "0.6.55"
|
||||
|
||||
[[ZygoteRules]]
|
||||
deps = ["MacroTools"]
|
||||
|
|
Loading…
Reference in a new issue