diff --git a/Manifest.toml b/Manifest.toml index a661022..f2c8fb7 100644 --- a/Manifest.toml +++ b/Manifest.toml @@ -1,9 +1,9 @@ # This file is machine-generated - editing it directly is not advised [[ADTypes]] -git-tree-sha1 = "f2b16fe1a3491b295105cae080c2a5f77a842718" +git-tree-sha1 = "5d2e21d7b0d8c22f67483ef95ebdc39c0e6b6003" uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" -version = "0.2.3" +version = "0.2.4" [[AbstractFFTs]] deps = ["ChainRulesCore", "LinearAlgebra", "Test"] @@ -158,9 +158,9 @@ version = "2.0.5" [[BioGenerics]] deps = ["TranscodingStreams"] -git-tree-sha1 = "0b581906418b93231d391b5dd78831fdc2da0c82" +git-tree-sha1 = "b001ecf63b2eaeb999f70319c0cc920d7d59a31f" uuid = "47718e42-2ac5-11e9-14af-e5595289c2ea" -version = "0.1.2" +version = "0.1.3" [[BioSequences]] deps = ["BioSymbols", "PrecompileTools", "Random", "Twiddle"] @@ -330,9 +330,9 @@ version = "0.4.0" [[ColorSchemes]] deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] -git-tree-sha1 = "d9a8f86737b665e15a9641ecbac64deef9ce6724" +git-tree-sha1 = "67c1f244b991cad9b0aa4b7540fb758c2488b129" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.23.0" +version = "3.24.0" [[ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -370,9 +370,9 @@ version = "0.3.0" [[Compat]] deps = ["Dates", "LinearAlgebra", "UUIDs"] -git-tree-sha1 = "e460f044ca8b99be31d35fe54fc33a5c33dd8ed7" +git-tree-sha1 = "8a62af3e248a8c4bad6b32cbbe663ae02275e32c" uuid = "34da2185-b29b-5c13-b0c7-acf172513d20" -version = "4.9.0" +version = "4.10.0" [[CompilerSupportLibraries_jll]] deps = ["Artifacts", "Libdl"] @@ -383,6 +383,11 @@ git-tree-sha1 = "52cb3ec90e8a8bea0e62e275ba577ad0f74821f7" uuid = "ed09eef8-17a6-5b46-8889-db040fac31e3" version = "0.3.2" +[[ConcreteStructs]] +git-tree-sha1 = "f749037478283d372048690eb3b5f92a79432b34" +uuid = "2569d6c7-a4a2-43d3-a901-331e8e4be471" +version = "0.2.3" + [[ConstructionBase]] deps = ["LinearAlgebra"] git-tree-sha1 = "c53fc348ca4d40d7b371e71fd52251839080cbc9" @@ -468,9 +473,9 @@ version = "0.12.3" [[DelayDiffEq]] deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "LinearAlgebra", "Logging", "OrdinaryDiffEq", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SimpleUnPack"] -git-tree-sha1 = "89f3fbfe78f9d116d1ed0721d65b0b2cf9b36169" +git-tree-sha1 = "92f9967824241fe37d02e6dd76afb73b562a3fcf" uuid = "bcd4f6db-9728-5f36-b5f7-82caef46ccdb" -version = "5.42.0" +version = "5.43.0" [[DelimitedFiles]] deps = ["Mmap"] @@ -483,22 +488,22 @@ uuid = "b429d917-457f-4dbc-8f4c-0cc954292b1d" version = "0.4.0" [[DiffEqBase]] -deps = ["ArrayInterface", "ChainRulesCore", "DataStructures", "Distributions", "DocStringExtensions", "EnumX", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces", "ZygoteRules"] -git-tree-sha1 = "dee066b8dce741815729f5973b6db757416948b7" +deps = ["ArrayInterface", "ChainRulesCore", "DataStructures", "Distributions", "DocStringExtensions", "EnumX", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces", "ZygoteRules"] +git-tree-sha1 = "0d9982e8dee851d519145857e79a17ee33ede154" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.128.4" +version = "6.130.0" [[DiffEqCallbacks]] -deps = ["DataStructures", "DiffEqBase", "ForwardDiff", "LinearAlgebra", "Markdown", "NLsolve", "Parameters", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArraysCore"] -git-tree-sha1 = "9c7d3a84264d935f6981504388b202a770113faa" +deps = ["DataStructures", "DiffEqBase", "ForwardDiff", "Functors", "LinearAlgebra", "Markdown", "NLsolve", "Parameters", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArraysCore"] +git-tree-sha1 = "acc53f895588767cbb296d3d8581ebd203524a2e" uuid = "459566f4-90b8-5000-8ac3-15dfb0a30def" -version = "2.29.1" +version = "2.33.0" [[DiffEqNoiseProcess]] deps = ["DiffEqBase", "Distributions", "GPUArraysCore", "LinearAlgebra", "Markdown", "Optim", "PoissonRandom", "QuadGK", "Random", "Random123", "RandomNumbers", "RecipesBase", "RecursiveArrayTools", "Requires", "ResettableStacks", "SciMLBase", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "6b02e9c9d0d4cacf2b20f36c33710b8b415c5194" +git-tree-sha1 = "57ed4597a309c5b2a10cab5f9813adcb78f92117" uuid = "77a26b50-5914-5dd7-bc55-306e6241c503" -version = "5.18.0" +version = "5.19.0" [[DiffResults]] deps = ["StaticArraysCore"] @@ -514,9 +519,9 @@ version = "1.15.1" [[DifferentialEquations]] deps = ["BoundaryValueDiffEq", "DelayDiffEq", "DiffEqBase", "DiffEqCallbacks", "DiffEqNoiseProcess", "JumpProcesses", "LinearAlgebra", "LinearSolve", "NonlinearSolve", "OrdinaryDiffEq", "Random", "RecursiveArrayTools", "Reexport", "SciMLBase", "SteadyStateDiffEq", "StochasticDiffEq", "Sundials"] -git-tree-sha1 = "c3d11164d1b08c379bc3c6abae45fcd7250e8e35" +git-tree-sha1 = "96a19f498504e4a3b39524196b73eb60ccef30e9" uuid = "0c46a032-eb83-5123-abaf-570d42b7fbaa" -version = "7.9.1" +version = "7.10.0" [[Discretizers]] deps = ["DataStructures", "SpecialFunctions", "Statistics", "StatsBase"] @@ -536,9 +541,9 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[Distributions]] deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "938fe2981db009f531b6332e31c58e9584a2f9bd" +git-tree-sha1 = "3d5873f811f582873bb9871fc9c451784d5dc8c7" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.100" +version = "0.25.102" [[DocStringExtensions]] deps = ["LibGit2"] @@ -561,6 +566,18 @@ git-tree-sha1 = "bdb1942cd4c45e3c678fd11569d5cccd80976237" uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56" version = "1.0.4" +[[EnzymeCore]] +deps = ["Adapt"] +git-tree-sha1 = "1091d4bbc2f2f7840a65fc0496c782b955dd82fb" +uuid = "f151be2c-9106-41f4-ab19-57ee4f262869" +version = "0.6.0" + +[[EpollShim_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "8e9441ee83492030ace98f9789a654a6d0b1f643" +uuid = "2702e6a9-849d-5ed8-8c21-79e8b8f9ee43" +version = "0.0.20230411+0" + [[Expat_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] git-tree-sha1 = "4558ab818dcceaab612d1bb8c19cee87eda2b83c" @@ -717,6 +734,12 @@ git-tree-sha1 = "04cb9cfaa6ba5311973994fe3496ddec19b6292a" uuid = "de31a74c-ac4f-5751-b3fd-e18cd04993ca" version = "0.5.0" +[[Functors]] +deps = ["LinearAlgebra"] +git-tree-sha1 = "9a68d75d466ccc1218d0552a8e1631151c569545" +uuid = "d9f16b24-f501-4c13-a1f2-28368ffc5196" +version = "0.4.5" + [[Future]] deps = ["Random"] uuid = "9fa8497b-333b-5362-9e8d-4d0656e87820" @@ -769,9 +792,9 @@ version = "0.5.3" [[GenomicAnnotations]] deps = ["BioGenerics", "BioSequences", "CodecZlib", "DataFrames", "TranscodingStreams"] -git-tree-sha1 = "f09dabebfce53df2f78dd0e603ae1f45f1b91ef1" +git-tree-sha1 = "268f710748354367e6a971cd644de800075e37dc" uuid = "4f8a0a0a-376d-5ac0-ab14-e88793df67f0" -version = "0.3.2" +version = "0.3.3" [[GenomicFeatures]] deps = ["BioGenerics", "DataStructures", "IntervalTrees"] @@ -805,9 +828,9 @@ version = "1.3.14+0" [[Graphs]] deps = ["ArnoldiMethod", "Compat", "DataStructures", "Distributed", "Inflate", "LinearAlgebra", "Random", "SharedArrays", "SimpleTraits", "SparseArrays", "Statistics"] -git-tree-sha1 = "1cf1d7dcb4bc32d7b4a5add4232db3750c27ecb4" +git-tree-sha1 = "899050ace26649433ef1af25bc17a815b3db52b7" uuid = "86223c79-3864-5bf0-83f7-82e725a168b6" -version = "1.8.0" +version = "1.9.0" [[Grisu]] git-tree-sha1 = "53bb909d1151e57e2484c3d1b53e19552b887fb2" @@ -1104,9 +1127,9 @@ version = "0.5.0" [[JLD2]] deps = ["FileIO", "MacroTools", "Mmap", "OrderedCollections", "Pkg", "Printf", "Reexport", "Requires", "TranscodingStreams", "UUIDs"] -git-tree-sha1 = "aa6ffef1fd85657f4999030c52eaeec22a279738" +git-tree-sha1 = "c11d691a0dc8e90acfa4740d293ade57f68bfdbb" uuid = "033835bb-8acc-5ee8-8aae-3f567f8a3819" -version = "0.4.33" +version = "0.4.35" [[JLFzf]] deps = ["Pipe", "REPL", "Random", "fzf_jll"] @@ -1146,9 +1169,9 @@ version = "0.7.8" [[JpegTurbo]] deps = ["CEnum", "FileIO", "ImageCore", "JpegTurbo_jll", "TOML"] -git-tree-sha1 = "327713faef2a3e5c80f96bf38d1fa26f7a6ae29e" +git-tree-sha1 = "d65930fa2bc96b07d7691c652d701dcbe7d9cf0b" uuid = "b835a17e-a41a-41e7-81f0-2f016b05efe0" -version = "0.1.3" +version = "0.1.4" [[JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -1170,9 +1193,9 @@ version = "0.6.3" [[JumpProcesses]] deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "FunctionWrappers", "Graphs", "LinearAlgebra", "Markdown", "PoissonRandom", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "StaticArrays", "TreeViews", "UnPack"] -git-tree-sha1 = "61068b4df1e434c26ff8b876fbaf2be3e3e44d27" +git-tree-sha1 = "3de1d557e382cad270d921fbc22351f5628e7b1f" uuid = "ccbc3e58-028d-4f4c-8cd5-9ae44345cda5" -version = "9.7.3" +version = "9.8.0" [[KLU]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse_jll"] @@ -1374,10 +1397,10 @@ deps = ["Libdl"] uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" [[LinearSolve]] -deps = ["ArrayInterface", "DocStringExtensions", "EnumX", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "Libdl", "LinearAlgebra", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "SuiteSparse", "UnPack"] -git-tree-sha1 = "69cbd612e6e67ba2f8121bc8725bc9d04d803599" +deps = ["ArrayInterface", "ConcreteStructs", "DocStringExtensions", "EnumX", "EnzymeCore", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "Libdl", "LinearAlgebra", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "SuiteSparse", "UnPack"] +git-tree-sha1 = "ba01f7a97d3d8bd711b2c00a8a68c887d8a85c9d" uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" -version = "2.5.1" +version = "2.8.1" [[LittleCMS_jll]] deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pkg"] @@ -1432,9 +1455,9 @@ version = "0.5.11" [[MakieCore]] deps = ["Observables"] -git-tree-sha1 = "1efb1166dd9398f2ccf6d728f896658c9c84733e" +git-tree-sha1 = "17d51182db2667962bc7e1d18b74881d0d0adbe6" uuid = "20f20a25-4f0e-4fdf-b5d1-57303727442b" -version = "0.6.6" +version = "0.6.7" [[ManualMemory]] git-tree-sha1 = "bcaef4fc7a0cfe2cba636d84cda54b5e4e4ca3cd" @@ -1458,9 +1481,9 @@ uuid = "d6f4376e-aef5-505a-96c1-9c027394607a" [[MathOptInterface]] deps = ["BenchmarkTools", "CodecBzip2", "CodecZlib", "DataStructures", "ForwardDiff", "JSON", "LinearAlgebra", "MutableArithmetics", "NaNMath", "OrderedCollections", "PrecompileTools", "Printf", "SparseArrays", "SpecialFunctions", "Test", "Unicode"] -git-tree-sha1 = "8bfc1519e9de0564d378b3886b21b9a2f04cbdb5" +git-tree-sha1 = "5c9f1e635e8d491297e596b56fec1c95eafb95a3" uuid = "b8f27783-ece8-5eb3-8dc8-9495eed66fee" -version = "1.20.0" +version = "1.20.1" [[MathProgBase]] deps = ["LinearAlgebra", "SparseArrays"] @@ -1538,9 +1561,9 @@ version = "1.0.17" [[MutableArithmetics]] deps = ["LinearAlgebra", "SparseArrays", "Test"] -git-tree-sha1 = "a7b647ce8f4fefbcaf7de28fa208c812e21dc18f" +git-tree-sha1 = "6985021d02ab8c509c841bb8b2becd3145a7b490" uuid = "d8a4904e-b15c-11e9-3269-09a3773c0cb0" -version = "1.3.2" +version = "1.3.3" [[MyterialColors]] git-tree-sha1 = "01d8466fb449436348999d7c6ad740f8f853a579" @@ -1612,9 +1635,9 @@ uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" [[NonlinearSolve]] deps = ["ArrayInterface", "DiffEqBase", "EnumX", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "LinearSolve", "PrecompileTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"] -git-tree-sha1 = "ee53089df81a6bdf3c06c17cf674e90931b10a73" +git-tree-sha1 = "e10debcea868cd6e51249e8eeaf191c25f68a640" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "1.10.0" +version = "1.10.1" [[Observables]] git-tree-sha1 = "6862738f9796b3edc1c09d0890afce4eca9e7e93" @@ -1702,9 +1725,9 @@ version = "1.6.2" [[OrdinaryDiffEq]] deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "InteractiveUtils", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLNLSolve", "SciMLOperators", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"] -git-tree-sha1 = "ba3ed480f991b846cf9a8118d3370d9752e7166d" +git-tree-sha1 = "16d4feaf7e17ac63cb6bb742b0a4dfd50d1ef458" uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" -version = "6.55.0" +version = "6.57.0" [[PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -1712,9 +1735,9 @@ uuid = "efcefdf7-47ab-520b-bdef-62a2eaa19f15" [[PDMats]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "67eae2738d63117a196f497d7db789821bce61d1" +git-tree-sha1 = "bf6085e8bd7735e68c210c6e5d81f9a6fe192060" uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" -version = "0.11.17" +version = "0.11.19" [[PGFPlots]] deps = ["ColorBrewer", "ColorSchemes", "Colors", "Contour", "DataFrames", "DelimitedFiles", "Discretizers", "Distributed", "ImageMagick", "Images", "Printf", "Requires", "StatsBase", "TikzPictures"] @@ -1730,9 +1753,9 @@ version = "0.4.0" [[PackageExtensionCompat]] deps = ["Requires", "TOML"] -git-tree-sha1 = "f9b1e033c2b1205cf30fd119f4e50881316c1923" +git-tree-sha1 = "fb28e33b8a95c4cee25ce296c817d89cc2e53518" uuid = "65ce6f38-6b18-4e1d-a461-8949797d7930" -version = "1.0.1" +version = "1.0.2" [[PaddedViews]] deps = ["OffsetArrays"] @@ -1811,9 +1834,9 @@ version = "0.4.4" [[Polyester]] deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StaticArrayInterface", "StrideArraysCore", "ThreadingUtilities"] -git-tree-sha1 = "3d811babe092a6e7b130beee84998fe7663348b6" +git-tree-sha1 = "c7dc9720390fcc296bf757b3f833f9e41c68a086" uuid = "f517fe37-dbe3-4b94-8317-1923a5111588" -version = "0.7.5" +version = "0.7.7" [[PolyesterWeave]] deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"] @@ -1829,9 +1852,9 @@ version = "4.0.4" [[PooledArrays]] deps = ["DataAPI", "Future"] -git-tree-sha1 = "a6062fe4063cdafe78f4a0a81cfffb89721b30e7" +git-tree-sha1 = "36d8b4b899628fb92c2749eb488d884a926614d3" uuid = "2dfb63ee-cc39-5dd5-95bd-886bf059d720" -version = "1.4.2" +version = "1.4.3" [[PopGen]] deps = ["Clustering", "DataFrames", "Distances", "Distributions", "MultipleTesting", "MultivariateStats", "NamedArrays", "OnlineStats", "PooledArrays", "PopGenCore", "Random", "Reexport", "StatsBase", "TSne", "Term"] @@ -1871,9 +1894,9 @@ version = "1.2.0" [[Preferences]] deps = ["TOML"] -git-tree-sha1 = "7eb1686b4f04b82f96ed7a4ea5890a4f0c7a09f1" +git-tree-sha1 = "00805cd429dcb4870060ff49ef443486c262e38e" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.4.0" +version = "1.4.1" [[PrettyTables]] deps = ["Crayons", "LaTeXStrings", "Markdown", "Printf", "Reexport", "StringManipulation", "Tables"] @@ -1927,9 +1950,9 @@ version = "5.15.3+2" [[QuadGK]] deps = ["DataStructures", "LinearAlgebra"] -git-tree-sha1 = "6ec7ac8412e83d57e313393220879ede1740f9ee" +git-tree-sha1 = "9ebcd48c498668c7fa0e97a9cae873fbee7bfee1" uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc" -version = "2.8.2" +version = "2.9.1" [[QuantEcon]] deps = ["DSP", "DataStructures", "Distributions", "FFTW", "Graphs", "LinearAlgebra", "Markdown", "NLopt", "Optim", "Pkg", "Primes", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "Test"] @@ -2047,15 +2070,15 @@ version = "0.4.0+0" [[Roots]] deps = ["ChainRulesCore", "CommonSolve", "Printf", "Setfield"] -git-tree-sha1 = "ff42754a57bb0d6dcfe302fd0d4272853190421f" +git-tree-sha1 = "06b5ac80ff1b88bd82df92c1c1875eea3954cd6e" uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665" -version = "2.0.19" +version = "2.0.20" [[Rotations]] deps = ["LinearAlgebra", "Quaternions", "Random", "StaticArrays"] -git-tree-sha1 = "54ccb4dbab4b1f69beb255a2c0ca5f65a9c82f08" +git-tree-sha1 = "0783924e4a332493f72490253ba4e668aeba1d73" uuid = "6038ab10-8711-5258-84ad-4b1120ba62dc" -version = "1.5.1" +version = "1.6.0" [[RuntimeGeneratedFunctions]] deps = ["ExprTools", "SHA", "Serialization"] @@ -2091,15 +2114,15 @@ version = "0.4.0" [[SciMLBase]] deps = ["ADTypes", "ArrayInterface", "ChainRulesCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces", "ZygoteRules"] -git-tree-sha1 = "827c87edbb5ad34a5e61accc99269285291c692e" +git-tree-sha1 = "916b8a94c0d61fa5f7c5295649d3746afb866aff" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.97.1" +version = "1.98.1" [[SciMLNLSolve]] deps = ["DiffEqBase", "LineSearches", "NLsolve", "Reexport", "SciMLBase"] -git-tree-sha1 = "9dfc8e9e3d58c0c74f1a821c762b5349da13eccf" +git-tree-sha1 = "765b788339abd7d983618c09cfc0192e2b6b15fd" uuid = "e9a6253c-8580-4d32-9898-8661bb511710" -version = "0.1.8" +version = "0.1.9" [[SciMLOperators]] deps = ["ArrayInterface", "DocStringExtensions", "Lazy", "LinearAlgebra", "Setfield", "SparseArrays", "StaticArraysCore", "Tricks"] @@ -2157,9 +2180,9 @@ version = "1.0.3" [[SimpleNonlinearSolve]] deps = ["ArrayInterface", "DiffEqBase", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "PackageExtensionCompat", "PrecompileTools", "Reexport", "SciMLBase", "StaticArraysCore"] -git-tree-sha1 = "20aa9831d654bab67ed561e78917047143ecb9bf" +git-tree-sha1 = "4d53b83af904049c493daaf2a225bcae994a3c59" uuid = "727e6d20-b764-4bd8-a329-72de5adea6c7" -version = "0.1.19" +version = "0.1.20" [[SimpleTraits]] deps = ["InteractiveUtils", "MacroTools"] @@ -2247,9 +2270,9 @@ version = "1.4.1" [[StaticArrays]] deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "51621cca8651d9e334a659443a74ce50a3b6dfab" +git-tree-sha1 = "0adf069a2a490c47273727e029371b31d44b72b2" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.6.3" +version = "1.6.5" [[StaticArraysCore]] git-tree-sha1 = "36b3d696ce6366023a0ea192b4cd442268995a0d" @@ -2292,9 +2315,9 @@ version = "0.15.6" [[SteadyStateDiffEq]] deps = ["DiffEqBase", "DiffEqCallbacks", "LinearAlgebra", "NLsolve", "Reexport", "SciMLBase"] -git-tree-sha1 = "6e801d0da4c81d9cd6a05d97340404f9892fba85" +git-tree-sha1 = "2ca69f4be3294e4cd987d83d6019037d420d9fc1" uuid = "9672c7b4-1e72-59bd-8a11-6ac3964bc41f" -version = "1.16.0" +version = "1.16.1" [[StochasticDiffEq]] deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqNoiseProcess", "DocStringExtensions", "FillArrays", "FiniteDiff", "ForwardDiff", "JumpProcesses", "LevyArea", "LinearAlgebra", "Logging", "MuladdMacro", "NLsolve", "OrdinaryDiffEq", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] @@ -2359,9 +2382,9 @@ uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c" [[Sundials]] deps = ["CEnum", "DataStructures", "DiffEqBase", "Libdl", "LinearAlgebra", "Logging", "PrecompileTools", "Reexport", "SciMLBase", "SparseArrays", "Sundials_jll"] -git-tree-sha1 = "c9b635bd3210bc29228c86cb44459b06dfffb229" +git-tree-sha1 = "b208d5379feee6c1c9f9660e4294e77e40946884" uuid = "c3572dad-4567-51f8-b174-8c6c989267f4" -version = "4.19.4" +version = "4.20.0" [[Sundials_jll]] deps = ["CompilerSupportLibraries_jll", "Libdl", "OpenBLAS_jll", "Pkg", "SuiteSparse_jll"] @@ -2398,10 +2421,10 @@ uuid = "3783bdb8-4a98-5b6b-af9a-565f29a5fe9c" version = "1.0.1" [[Tables]] -deps = ["DataAPI", "DataValueInterfaces", "IteratorInterfaceExtensions", "LinearAlgebra", "OrderedCollections", "TableTraits", "Test"] -git-tree-sha1 = "1544b926975372da01227b382066ab70e574a3ec" +deps = ["DataAPI", "DataValueInterfaces", "IteratorInterfaceExtensions", "LinearAlgebra", "OrderedCollections", "TableTraits"] +git-tree-sha1 = "a1f34829d5ac0ef499f6d84428bd6b4c71f02ead" uuid = "bd369af6-aec1-5ad0-b16a-f7cc5008161c" -version = "1.10.1" +version = "1.11.0" [[Tar]] deps = ["ArgTools", "SHA"] @@ -2436,9 +2459,9 @@ version = "0.5.2" [[TiffImages]] deps = ["ColorTypes", "DataStructures", "DocStringExtensions", "FileIO", "FixedPointNumbers", "IndirectArrays", "Inflate", "Mmap", "OffsetArrays", "PkgVersion", "ProgressMeter", "UUIDs"] -git-tree-sha1 = "8621f5c499a8aa4aa970b1ae381aae0ef1576966" +git-tree-sha1 = "b7dc44cb005a7ef743b8fe98970afef003efdce7" uuid = "731e570b-9d59-4bfa-96dc-6df516fadf69" -version = "0.6.4" +version = "0.6.6" [[TikzPictures]] deps = ["LaTeXStrings", "Poppler_jll", "Requires", "tectonic_jll"] @@ -2557,10 +2580,10 @@ uuid = "19fa3120-7c27-5ec5-8db8-b0b0aa330d6f" version = "0.2.0" [[Wayland_jll]] -deps = ["Artifacts", "Expat_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg", "XML2_jll"] -git-tree-sha1 = "ed8d92d9774b077c53e1da50fd81a36af3744c1c" +deps = ["Artifacts", "EpollShim_jll", "Expat_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg", "XML2_jll"] +git-tree-sha1 = "7558e29847e99bc3f04d6569e82d0f5c54460703" uuid = "a2964d1f-97da-50d4-b82a-358c7fce9d89" -version = "1.21.0+0" +version = "1.21.0+1" [[Wayland_protocols_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -2623,9 +2646,9 @@ version = "0.3.1" [[XML2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Zlib_jll"] -git-tree-sha1 = "04a51d15436a572301b5abbb9d099713327e9fc4" +git-tree-sha1 = "24b81b59bd35b3c42ab84fa589086e19be919916" uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a" -version = "2.10.4+0" +version = "2.11.5+0" [[XMLDict]] deps = ["EzXML", "IterTools", "OrderedCollections"] @@ -2801,9 +2824,9 @@ version = "1.5.5+0" [[Zygote]] deps = ["AbstractFFTs", "ChainRules", "ChainRulesCore", "DiffRules", "Distributed", "FillArrays", "ForwardDiff", "GPUArrays", "GPUArraysCore", "IRTools", "InteractiveUtils", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "PrecompileTools", "Random", "Requires", "SparseArrays", "SpecialFunctions", "Statistics", "ZygoteRules"] -git-tree-sha1 = "b97c927497c1de55a78dc9030f6068be5d83ef80" +git-tree-sha1 = "16848c23e7961e099a4152ba0d10db887f412ee9" uuid = "e88e6eb3-aa80-5325-afca-941959d7151f" -version = "0.6.64" +version = "0.6.65" [[ZygoteRules]] deps = ["ChainRulesCore", "MacroTools"] @@ -2893,6 +2916,6 @@ version = "3.5.0+0" [[xkbcommon_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Wayland_jll", "Wayland_protocols_jll", "Xorg_libxcb_jll", "Xorg_xkeyboard_config_jll"] -git-tree-sha1 = "9ebfc140cc56e8c2156a15ceac2f0302e327ac0a" +git-tree-sha1 = "9c304562909ab2bab0262639bd4f444d7bc2be37" uuid = "d8fb68d0-12a3-5cfd-a85a-d49703b185fd" -version = "1.4.1+0" +version = "1.4.1+1"