millironx/docker-BioJulia
1
0
Fork 0
mirror of https://github.com/MillironX/docker-BioJulia.git synced 2024-11-23 07:09:56 +00:00
Code Issues Releases Packages Activity

[⚡ AUTOMATED]: Pkg upgrade for 2022-12-02

Browse source 
Files changed:\nM	Manifest.toml
This commit is contained in:
MillironX 2022-12-02 02:16:07 +00:00
parent d41c34b7b1
commit c084b00c84
1 changed files with 138 additions and 144 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

282
Manifest.toml
View file

@ -46,9 +46,9 @@ version = "3.5.0+3"
[[ArrayInterface]] [[ArrayInterface]]
deps = ["ArrayInterfaceCore", "Compat", "IfElse", "LinearAlgebra", "Static"] deps = ["ArrayInterfaceCore", "Compat", "IfElse", "LinearAlgebra", "Static"]
git-tree-sha1 = "d6173480145eb632d6571c148d94b9d3d773820e" git-tree-sha1 = "6d0918cb9c0d3db7fe56bea2bc8638fc4014ac35"
uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9"
version = "6.0.23" version = "6.0.24"
[[ArrayInterfaceCore]] [[ArrayInterfaceCore]]
deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"]
@ -69,10 +69,10 @@ uuid = "015c0d05-e682-4f19-8f0a-679ce4c54826"
version = "0.1.7" version = "0.1.7"
[[ArrayInterfaceStaticArrays]] [[ArrayInterfaceStaticArrays]]
deps = ["Adapt", "ArrayInterface", "ArrayInterfaceStaticArraysCore", "LinearAlgebra", "Static", "StaticArrays"] deps = ["Adapt", "ArrayInterface", "ArrayInterfaceCore", "ArrayInterfaceStaticArraysCore", "LinearAlgebra", "Static", "StaticArrays"]
git-tree-sha1 = "efb000a9f643f018d5154e56814e338b5746c560" git-tree-sha1 = "f12dc65aef03d0a49650b20b2fdaf184928fd886"
uuid = "b0d46f97-bff5-4637-a19a-dd75974142cd" uuid = "b0d46f97-bff5-4637-a19a-dd75974142cd"
version = "0.1.4" version = "0.1.5"
[[ArrayInterfaceStaticArraysCore]] [[ArrayInterfaceStaticArraysCore]]
deps = ["Adapt", "ArrayInterfaceCore", "LinearAlgebra", "StaticArraysCore"] deps = ["Adapt", "ArrayInterfaceCore", "LinearAlgebra", "StaticArraysCore"]
@ -82,9 +82,9 @@ version = "0.1.3"
[[ArrayLayouts]] [[ArrayLayouts]]
deps = ["FillArrays", "LinearAlgebra", "SparseArrays"] deps = ["FillArrays", "LinearAlgebra", "SparseArrays"]
git-tree-sha1 = "7c3a0ce8d64ad84438b1bf60eca4f003a84e33e1" git-tree-sha1 = "2da56525d2d60e9b205c788e3b61b7aed5e721c6"
uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a" uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a"
version = "0.8.14" version = "0.8.15"
[[Artifacts]] [[Artifacts]]
uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33"
@ -138,9 +138,9 @@ version = "0.3.1"
[[BandedMatrices]] [[BandedMatrices]]
deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "SparseArrays"] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "SparseArrays"]
git-tree-sha1 = "45fc0722d59676040e356e7c059d6e51c2b24382" git-tree-sha1 = "134fe629f08ca56f07b1d8028736dab437df34f5"
uuid = "aae01518-5342-5314-be14-df237901396f" uuid = "aae01518-5342-5314-be14-df237901396f"
version = "0.17.8" version = "0.17.9"
[[Base64]] [[Base64]]
uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f"
@ -177,9 +177,9 @@ version = "0.1.2"
[[BioSequences]] [[BioSequences]]
deps = ["BioSymbols", "Random", "SnoopPrecompile", "Twiddle"] deps = ["BioSymbols", "Random", "SnoopPrecompile", "Twiddle"]
git-tree-sha1 = "90d2f278c4a20d43a885feb4847b8694d1ba4a60" git-tree-sha1 = "e67b5446b44d96595ededa2b32ab0f2f6b3d2997"
uuid = "7e6ae17a-c86d-528c-b3b9-7f778a29fe59" uuid = "7e6ae17a-c86d-528c-b3b9-7f778a29fe59"
version = "3.1.1" version = "3.1.2"
[[BioServices]] [[BioServices]]
deps = ["Dates", "Gumbo", "HTTP", "JSON", "XMLDict"] deps = ["Dates", "Gumbo", "HTTP", "JSON", "XMLDict"]
@ -283,9 +283,9 @@ version = "0.1.4"
[[CloseOpenIntervals]] [[CloseOpenIntervals]]
deps = ["ArrayInterface", "Static"] deps = ["ArrayInterface", "Static"]
git-tree-sha1 = "5522c338564580adf5d58d91e43a55db0fa5fb39" git-tree-sha1 = "d61300b9895f129f4bd684b2aff97cf319b6c493"
uuid = "fb6a15b2-703c-40df-9091-08a04967cfa9" uuid = "fb6a15b2-703c-40df-9091-08a04967cfa9"
version = "0.1.10" version = "0.1.11"
[[Clustering]] [[Clustering]]
deps = ["Distances", "LinearAlgebra", "NearestNeighbors", "Printf", "Random", "SparseArrays", "Statistics", "StatsBase"] deps = ["Distances", "LinearAlgebra", "NearestNeighbors", "Printf", "Random", "SparseArrays", "Statistics", "StatsBase"]
@ -342,10 +342,10 @@ uuid = "a2cac450-b92f-5266-8821-25eda20663c8"
version = "0.4.0" version = "0.4.0"
[[ColorSchemes]] [[ColorSchemes]]
deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Random"] deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Random", "SnoopPrecompile"]
git-tree-sha1 = "1fd869cc3875b57347f7027521f561cf46d1fcd8" git-tree-sha1 = "aa3edc8f8dea6cbfa176ee12f7c2fc82f0608ed3"
uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4"
version = "3.19.0" version = "3.20.0"
[[ColorTypes]] [[ColorTypes]]
deps = ["FixedPointNumbers", "Random"] deps = ["FixedPointNumbers", "Random"]
@ -383,9 +383,9 @@ version = "0.3.0"
[[Compat]] [[Compat]]
deps = ["Dates", "LinearAlgebra", "UUIDs"] deps = ["Dates", "LinearAlgebra", "UUIDs"]
git-tree-sha1 = "aaabba4ce1b7f8a9b34c015053d3b1edf60fa49c" git-tree-sha1 = "00a2cccc7f098ff3b66806862d275ca3db9e6e5a"
uuid = "34da2185-b29b-5c13-b0c7-acf172513d20" uuid = "34da2185-b29b-5c13-b0c7-acf172513d20"
version = "4.4.0" version = "4.5.0"
[[CompilerSupportLibraries_jll]] [[CompilerSupportLibraries_jll]]
deps = ["Artifacts", "Libdl"] deps = ["Artifacts", "Libdl"]
@ -443,9 +443,9 @@ version = "1.13.0"
[[DataFrames]] [[DataFrames]]
deps = ["Compat", "DataAPI", "Future", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrettyTables", "Printf", "REPL", "Random", "Reexport", "SnoopPrecompile", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"] deps = ["Compat", "DataAPI", "Future", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrettyTables", "Printf", "REPL", "Random", "Reexport", "SnoopPrecompile", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"]
git-tree-sha1 = "0f44494fe4271cc966ac4fea524111bef63ba86c" git-tree-sha1 = "d4f69885afa5e6149d0cab3818491565cf41446d"
uuid = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0" uuid = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0"
version = "1.4.3" version = "1.4.4"
[[DataStructures]] [[DataStructures]]
deps = ["Compat", "InteractiveUtils", "OrderedCollections"] deps = ["Compat", "InteractiveUtils", "OrderedCollections"]
@ -476,15 +476,15 @@ version = "0.7.6"
[[DecisionTree]] [[DecisionTree]]
deps = ["AbstractTrees", "DelimitedFiles", "LinearAlgebra", "Random", "ScikitLearnBase", "Statistics"] deps = ["AbstractTrees", "DelimitedFiles", "LinearAlgebra", "Random", "ScikitLearnBase", "Statistics"]
git-tree-sha1 = "fb3f7ff27befb9877bee84076dd9173185d7d86a" git-tree-sha1 = "5ab40e9f5a554a642bc5ab1d20a198f76a1e6958"
uuid = "7806a523-6efd-50cb-b5f6-3fa6f1930dbb" uuid = "7806a523-6efd-50cb-b5f6-3fa6f1930dbb"
version = "0.11.2" version = "0.12.0"
[[DelayDiffEq]] [[DelayDiffEq]]
deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "LinearAlgebra", "Logging", "NonlinearSolve", "OrdinaryDiffEq", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "UnPack"] deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "LinearAlgebra", "Logging", "OrdinaryDiffEq", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "UnPack"]
git-tree-sha1 = "4e1edae7af4bb6ea81e885a5a1c417f1218012db" git-tree-sha1 = "86f442c42394975c71dc1ee116c7cfc410ebe828"
uuid = "bcd4f6db-9728-5f36-b5f7-82caef46ccdb" uuid = "bcd4f6db-9728-5f36-b5f7-82caef46ccdb"
version = "5.39.1" version = "5.40.3"
[[DelimitedFiles]] [[DelimitedFiles]]
deps = ["Mmap"] deps = ["Mmap"]
@ -497,10 +497,10 @@ uuid = "b429d917-457f-4dbc-8f4c-0cc954292b1d"
version = "0.4.0" version = "0.4.0"
[[DiffEqBase]] [[DiffEqBase]]
deps = ["ArrayInterfaceCore", "ChainRulesCore", "DataStructures", "Distributions", "DocStringExtensions", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "MuladdMacro", "NonlinearSolve", "Parameters", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "Static", "StaticArrays", "Statistics", "Tricks", "ZygoteRules"] deps = ["ArrayInterfaceCore", "ChainRulesCore", "DataStructures", "Distributions", "DocStringExtensions", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "MuladdMacro", "Parameters", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "Setfield", "SimpleNonlinearSolve", "SparseArrays", "Static", "StaticArrays", "Statistics", "Tricks", "ZygoteRules"]
git-tree-sha1 = "c8514cbef84124a40906655d9ca938fa5ac5892c" git-tree-sha1 = "c6cdad9a11faf1da7602d46241fcb8b7deecdc7c"
uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
version = "6.106.0" version = "6.109.0"
[[DiffEqCallbacks]] [[DiffEqCallbacks]]
deps = ["DataStructures", "DiffEqBase", "ForwardDiff", "LinearAlgebra", "Markdown", "NLsolve", "Parameters", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArrays"] deps = ["DataStructures", "DiffEqBase", "ForwardDiff", "LinearAlgebra", "Markdown", "NLsolve", "Parameters", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArrays"]
@ -550,9 +550,9 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b"
[[Distributions]] [[Distributions]]
deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"]
git-tree-sha1 = "7fe1eff48e18a91946ff753baf834ff4d5c03744" git-tree-sha1 = "a7756d098cbabec6b3ac44f369f74915e8cfd70a"
uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f"
version = "0.25.78" version = "0.25.79"
[[DocStringExtensions]] [[DocStringExtensions]]
deps = ["LibGit2"] deps = ["LibGit2"]
@ -571,9 +571,9 @@ uuid = "fa6b7ba4-c1ee-5f82-b5fc-ecf0adba8f74"
version = "0.6.8" version = "0.6.8"
[[EnumX]] [[EnumX]]
git-tree-sha1 = "e5333cd1e1c713ee21d07b6ed8b0d8853fabe650" git-tree-sha1 = "bdb1942cd4c45e3c678fd11569d5cccd80976237"
uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56" uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56"
version = "1.0.3" version = "1.0.4"
[[Expat_jll]] [[Expat_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
@ -636,9 +636,9 @@ version = "3.3.10+0"
[[FastBroadcast]] [[FastBroadcast]]
deps = ["ArrayInterface", "ArrayInterfaceCore", "LinearAlgebra", "Polyester", "Static", "StrideArraysCore"] deps = ["ArrayInterface", "ArrayInterfaceCore", "LinearAlgebra", "Polyester", "Static", "StrideArraysCore"]
git-tree-sha1 = "21cdeff41e5a1822c2acd7fc7934c5f450588e00" git-tree-sha1 = "24db26ecc4c8a00584672d3b4c6cb0bb3dad9d51"
uuid = "7034ab61-46d4-4ed7-9d0f-46aef9175898" uuid = "7034ab61-46d4-4ed7-9d0f-46aef9175898"
version = "0.2.1" version = "0.2.3"
[[FastClosures]] [[FastClosures]]
git-tree-sha1 = "acebe244d53ee1b461970f8910c235b259e772ef" git-tree-sha1 = "acebe244d53ee1b461970f8910c235b259e772ef"
@ -674,9 +674,9 @@ version = "0.13.5"
[[FiniteDiff]] [[FiniteDiff]]
deps = ["ArrayInterfaceCore", "LinearAlgebra", "Requires", "Setfield", "SparseArrays", "StaticArrays"] deps = ["ArrayInterfaceCore", "LinearAlgebra", "Requires", "Setfield", "SparseArrays", "StaticArrays"]
git-tree-sha1 = "bb61d9e5085784fe453f70c97b23964c5bf36942" git-tree-sha1 = "04ed1f0029b6b3af88343e439b995141cb0d0b8d"
uuid = "6a86dc24-6348-571c-b903-95158fe2bd41" uuid = "6a86dc24-6348-571c-b903-95158fe2bd41"
version = "2.16.0" version = "2.17.0"
[[FixedPointNumbers]] [[FixedPointNumbers]]
deps = ["Statistics"] deps = ["Statistics"]
@ -770,16 +770,16 @@ uuid = "46192b85-c4d5-4398-a991-12ede77f4527"
version = "0.1.2" version = "0.1.2"
[[GR]] [[GR]]
deps = ["Base64", "DelimitedFiles", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "Test", "UUIDs"] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "UUIDs", "p7zip_jll"]
git-tree-sha1 = "00a9d4abadc05b9476e937a5557fcce476b9e547" git-tree-sha1 = "051072ff2accc6e0e87b708ddee39b18aa04a0bc"
uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71"
version = "0.69.5" version = "0.71.1"
[[GR_jll]] [[GR_jll]]
deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Pkg", "Qt5Base_jll", "Zlib_jll", "libpng_jll"] deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Pkg", "Qt5Base_jll", "Zlib_jll", "libpng_jll"]
git-tree-sha1 = "bc9f7725571ddb4ab2c4bc74fa397c1c5ad08943" git-tree-sha1 = "501a4bf76fd679e7fcd678725d5072177392e756"
uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9"
version = "0.69.1+0" version = "0.71.1+0"
[[GenericSchur]] [[GenericSchur]]
deps = ["LinearAlgebra", "Printf"] deps = ["LinearAlgebra", "Printf"]
@ -1063,9 +1063,9 @@ version = "0.14.6"
[[IntervalSets]] [[IntervalSets]]
deps = ["Dates", "Random", "Statistics"] deps = ["Dates", "Random", "Statistics"]
git-tree-sha1 = "3f91cd3f56ea48d4d2a75c2a65455c5fc74fa347" git-tree-sha1 = "16c0cc91853084cb5f58a78bd209513900206ce6"
uuid = "8197267c-284f-5f27-9208-e0e47529a953" uuid = "8197267c-284f-5f27-9208-e0e47529a953"
version = "0.7.3" version = "0.7.4"
[[IntervalTrees]] [[IntervalTrees]]
deps = ["InteractiveUtils", "Profile", "Random", "Test"] deps = ["InteractiveUtils", "Profile", "Random", "Test"]
@ -1080,9 +1080,9 @@ uuid = "3587e190-3f89-42d0-90ee-14403ec27112"
version = "0.1.8" version = "0.1.8"
[[InvertedIndices]] [[InvertedIndices]]
git-tree-sha1 = "bee5f1ef5bf65df56bdd2e40447590b272a5471f" git-tree-sha1 = "82aec7a3dd64f4d9584659dc0b62ef7db2ef3e19"
uuid = "41ab1584-1d38-5bbf-9106-f11c6c58b48f" uuid = "41ab1584-1d38-5bbf-9106-f11c6c58b48f"
version = "1.1.0" version = "1.2.0"
[[IrrationalConstants]] [[IrrationalConstants]]
git-tree-sha1 = "7fd44fd4ff43fc60815f8e764c0f352b83c49151" git-tree-sha1 = "7fd44fd4ff43fc60815f8e764c0f352b83c49151"
@ -1113,9 +1113,9 @@ version = "0.5.0"
[[JLD2]] [[JLD2]]
deps = ["FileIO", "MacroTools", "Mmap", "OrderedCollections", "Pkg", "Printf", "Reexport", "TranscodingStreams", "UUIDs"] deps = ["FileIO", "MacroTools", "Mmap", "OrderedCollections", "Pkg", "Printf", "Reexport", "TranscodingStreams", "UUIDs"]
git-tree-sha1 = "18dd357553912b6adc23b5f721e4be19930140c6" git-tree-sha1 = "ec8a9c9f0ecb1c687e34c1fda2699de4d054672a"
uuid = "033835bb-8acc-5ee8-8aae-3f567f8a3819" uuid = "033835bb-8acc-5ee8-8aae-3f567f8a3819"
version = "0.4.28" version = "0.4.29"
[[JLFzf]] [[JLFzf]]
deps = ["Pipe", "REPL", "Random", "fzf_jll"] deps = ["Pipe", "REPL", "Random", "fzf_jll"]
@ -1167,9 +1167,9 @@ version = "2.1.2+0"
[[JuliaInterpreter]] [[JuliaInterpreter]]
deps = ["CodeTracking", "InteractiveUtils", "Random", "UUIDs"] deps = ["CodeTracking", "InteractiveUtils", "Random", "UUIDs"]
git-tree-sha1 = "0f960b1404abb0b244c1ece579a0ec78d056a5d1" git-tree-sha1 = "a79c4cf60cc7ddcdcc70acbb7216a5f9b4f8d188"
uuid = "aa1ae85d-cabe-5617-a682-6adf51b2e16a" uuid = "aa1ae85d-cabe-5617-a682-6adf51b2e16a"
version = "0.9.15" version = "0.9.16"
[[JuliaWebAPI]] [[JuliaWebAPI]]
deps = ["Base64", "HTTP", "JSON", "Serialization", "Sockets", "ZMQ"] deps = ["Base64", "HTTP", "JSON", "Serialization", "Sockets", "ZMQ"]
@ -1179,9 +1179,9 @@ version = "0.6.3"
[[JumpProcesses]] [[JumpProcesses]]
deps = ["ArrayInterfaceCore", "DataStructures", "DiffEqBase", "DocStringExtensions", "FunctionWrappers", "Graphs", "LinearAlgebra", "Markdown", "PoissonRandom", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "StaticArrays", "TreeViews", "UnPack"] deps = ["ArrayInterfaceCore", "DataStructures", "DiffEqBase", "DocStringExtensions", "FunctionWrappers", "Graphs", "LinearAlgebra", "Markdown", "PoissonRandom", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "StaticArrays", "TreeViews", "UnPack"]
git-tree-sha1 = "535605173bbf752b37b80440d6baaad28db0fcea" git-tree-sha1 = "2cc453fad790410a40a6efe38e46c9c5a9c6fa41"
uuid = "ccbc3e58-028d-4f4c-8cd5-9ae44345cda5" uuid = "ccbc3e58-028d-4f4c-8cd5-9ae44345cda5"
version = "9.2.2" version = "9.2.3"
[[KLU]] [[KLU]]
deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse_jll"] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse_jll"]
@ -1209,9 +1209,9 @@ version = "0.2.6"
[[Krylov]] [[Krylov]]
deps = ["LinearAlgebra", "Printf", "SparseArrays"] deps = ["LinearAlgebra", "Printf", "SparseArrays"]
git-tree-sha1 = "92256444f81fb094ff5aa742ed10835a621aef75" git-tree-sha1 = "dd90aacbfb622f898a97c2a4411ac49101ebab8a"
uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7" uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7"
version = "0.8.4" version = "0.9.0"
[[KrylovKit]] [[KrylovKit]]
deps = ["ChainRulesCore", "GPUArraysCore", "LinearAlgebra", "Printf"] deps = ["ChainRulesCore", "GPUArraysCore", "LinearAlgebra", "Printf"]
@ -1233,9 +1233,9 @@ version = "3.0.0+1"
[[LLVM]] [[LLVM]]
deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"] deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"]
git-tree-sha1 = "e7e9184b0bf0158ac4e4aa9daf00041b5909bf1a" git-tree-sha1 = "088dd02b2797f0233d92583562ab669de8517fd1"
uuid = "929cbde3-209d-540e-8aea-75f648917ca0" uuid = "929cbde3-209d-540e-8aea-75f648917ca0"
version = "4.14.0" version = "4.14.1"
[[LLVMExtra_jll]] [[LLVMExtra_jll]]
deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg", "TOML"] deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg", "TOML"]
@ -1262,9 +1262,9 @@ version = "0.15.17"
[[LayoutPointers]] [[LayoutPointers]]
deps = ["ArrayInterface", "ArrayInterfaceOffsetArrays", "ArrayInterfaceStaticArrays", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static"] deps = ["ArrayInterface", "ArrayInterfaceOffsetArrays", "ArrayInterfaceStaticArrays", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static"]
git-tree-sha1 = "73e2e40eb02d6ccd191a8a9f8cee20db8d5df010" git-tree-sha1 = "7e34177793212f6d64d045ee47d2883f09fffacc"
uuid = "10f19ff3-798f-405d-979b-55457f8fc047" uuid = "10f19ff3-798f-405d-979b-55457f8fc047"
version = "0.1.11" version = "0.1.12"
[[LazyArtifacts]] [[LazyArtifacts]]
deps = ["Artifacts", "Pkg"] deps = ["Artifacts", "Pkg"]
@ -1314,9 +1314,9 @@ version = "1.8.7+0"
[[Libglvnd_jll]] [[Libglvnd_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll", "Xorg_libXext_jll"] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll", "Xorg_libXext_jll"]
git-tree-sha1 = "7739f837d6447403596a75d19ed01fd08d6f56bf" git-tree-sha1 = "6f73d1dd803986947b2c750138528a999a6c7733"
uuid = "7e76a0d4-f3c7-5321-8279-8d96eeed0f29" uuid = "7e76a0d4-f3c7-5321-8279-8d96eeed0f29"
version = "1.3.0+3" version = "1.6.0+0"
[[Libgpg_error_jll]] [[Libgpg_error_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
@ -1377,10 +1377,10 @@ deps = ["Libdl"]
uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
[[LinearSolve]] [[LinearSolve]]
deps = ["ArrayInterfaceCore", "DocStringExtensions", "FastLapackInterface", "GPUArraysCore", "IterativeSolvers", "KLU", "Krylov", "KrylovKit", "LinearAlgebra", "RecursiveFactorization", "Reexport", "SciMLBase", "Setfield", "SnoopPrecompile", "SparseArrays", "SuiteSparse", "UnPack"] deps = ["ArrayInterfaceCore", "DocStringExtensions", "FastLapackInterface", "GPUArraysCore", "IterativeSolvers", "KLU", "Krylov", "KrylovKit", "LinearAlgebra", "Preferences", "RecursiveFactorization", "Reexport", "SciMLBase", "Setfield", "SnoopPrecompile", "SparseArrays", "SuiteSparse", "UnPack"]
git-tree-sha1 = "7af848f614840d768002b607e297a51bdc62955f" git-tree-sha1 = "f0f5e314dec9b4156fdd7be746923ddd9fb07efc"
uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae"
version = "1.28.0" version = "1.31.0"
[[LittleCMS_jll]] [[LittleCMS_jll]]
deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pkg"] deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pkg"]
@ -1390,18 +1390,18 @@ version = "2.12.0+0"
[[LogExpFunctions]] [[LogExpFunctions]]
deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"]
git-tree-sha1 = "94d9c52ca447e23eac0c0f074effbcd38830deb5" git-tree-sha1 = "946607f84feb96220f480e0422d3484c49c00239"
uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688"
version = "0.3.18" version = "0.3.19"
[[Logging]] [[Logging]]
uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" uuid = "56ddb016-857b-54e1-b83d-db4d58db5568"
[[LoopVectorization]] [[LoopVectorization]]
deps = ["ArrayInterface", "ArrayInterfaceCore", "ArrayInterfaceOffsetArrays", "ArrayInterfaceStaticArrays", "CPUSummary", "ChainRulesCore", "CloseOpenIntervals", "DocStringExtensions", "ForwardDiff", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "SIMDDualNumbers", "SIMDTypes", "SLEEFPirates", "SnoopPrecompile", "SpecialFunctions", "Static", "ThreadingUtilities", "UnPack", "VectorizationBase"] deps = ["ArrayInterface", "ArrayInterfaceCore", "ArrayInterfaceOffsetArrays", "ArrayInterfaceStaticArrays", "CPUSummary", "ChainRulesCore", "CloseOpenIntervals", "DocStringExtensions", "ForwardDiff", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "SIMDDualNumbers", "SIMDTypes", "SLEEFPirates", "SnoopPrecompile", "SpecialFunctions", "Static", "ThreadingUtilities", "UnPack", "VectorizationBase"]
git-tree-sha1 = "9b90f3cf246e239dc7d79588c96586ab9b3c0a00" git-tree-sha1 = "da5317a78e2a9f692730345cf3ff820109f406d3"
uuid = "bdcacae8-1622-11e9-2a5c-532679323890" uuid = "bdcacae8-1622-11e9-2a5c-532679323890"
version = "0.12.139" version = "0.12.141"
[[Lz4_jll]] [[Lz4_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
@ -1455,9 +1455,9 @@ uuid = "d6f4376e-aef5-505a-96c1-9c027394607a"
[[MathOptInterface]] [[MathOptInterface]]
deps = ["BenchmarkTools", "CodecBzip2", "CodecZlib", "DataStructures", "ForwardDiff", "JSON", "LinearAlgebra", "MutableArithmetics", "NaNMath", "OrderedCollections", "Printf", "SparseArrays", "SpecialFunctions", "Test", "Unicode"] deps = ["BenchmarkTools", "CodecBzip2", "CodecZlib", "DataStructures", "ForwardDiff", "JSON", "LinearAlgebra", "MutableArithmetics", "NaNMath", "OrderedCollections", "Printf", "SparseArrays", "SpecialFunctions", "Test", "Unicode"]
git-tree-sha1 = "ceed48edffe0325a6e9ea00ecf3607af5089c413" git-tree-sha1 = "09c6964bf4bca818867494739a9387c0c9cf4e2c"
uuid = "b8f27783-ece8-5eb3-8dc8-9495eed66fee" uuid = "b8f27783-ece8-5eb3-8dc8-9495eed66fee"
version = "1.9.0" version = "1.11.0"
[[MathProgBase]] [[MathProgBase]]
deps = ["LinearAlgebra", "SparseArrays"] deps = ["LinearAlgebra", "SparseArrays"]
@ -1497,9 +1497,9 @@ uuid = "a63ad114-7e13-5084-954f-fe012c677804"
[[MosaicViews]] [[MosaicViews]]
deps = ["MappedArrays", "OffsetArrays", "PaddedViews", "StackViews"] deps = ["MappedArrays", "OffsetArrays", "PaddedViews", "StackViews"]
git-tree-sha1 = "b34e3bc3ca7c94914418637cb10cc4d1d80d877d" git-tree-sha1 = "7b86a5d4d70a9f5cdf2dacb3cbe6d251d1a61dbe"
uuid = "e94cdb99-869f-56ef-bcf0-1ae2bcbe0389" uuid = "e94cdb99-869f-56ef-bcf0-1ae2bcbe0389"
version = "0.3.3" version = "0.3.4"
[[MozillaCACerts_jll]] [[MozillaCACerts_jll]]
uuid = "14a3606d-f60d-562e-9121-12d972cd8159" uuid = "14a3606d-f60d-562e-9121-12d972cd8159"
@ -1535,9 +1535,9 @@ version = "1.0.14"
[[MutableArithmetics]] [[MutableArithmetics]]
deps = ["LinearAlgebra", "SparseArrays", "Test"] deps = ["LinearAlgebra", "SparseArrays", "Test"]
git-tree-sha1 = "1d57a7dc42d563ad6b5e95d7a8aebd550e5162c0" git-tree-sha1 = "aa532179d4a643d4bd9f328589ca01fa20a0d197"
uuid = "d8a4904e-b15c-11e9-3269-09a3773c0cb0" uuid = "d8a4904e-b15c-11e9-3269-09a3773c0cb0"
version = "1.0.5" version = "1.1.0"
[[MyterialColors]] [[MyterialColors]]
git-tree-sha1 = "01d8466fb449436348999d7c6ad740f8f853a579" git-tree-sha1 = "01d8466fb449436348999d7c6ad740f8f853a579"
@ -1546,9 +1546,9 @@ version = "0.3.0"
[[NLSolversBase]] [[NLSolversBase]]
deps = ["DiffResults", "Distributed", "FiniteDiff", "ForwardDiff"] deps = ["DiffResults", "Distributed", "FiniteDiff", "ForwardDiff"]
git-tree-sha1 = "50310f934e55e5ca3912fb941dec199b49ca9b68" git-tree-sha1 = "a0b464d183da839699f4c79e7606d9d186ec172c"
uuid = "d41bc354-129a-5804-8e4c-c37616107c6c" uuid = "d41bc354-129a-5804-8e4c-c37616107c6c"
version = "7.8.2" version = "7.8.3"
[[NLopt]] [[NLopt]]
deps = ["MathOptInterface", "MathProgBase", "NLopt_jll"] deps = ["MathOptInterface", "MathProgBase", "NLopt_jll"]
@ -1587,10 +1587,10 @@ uuid = "b8a86587-4115-5ab1-83bc-aa920d37bbce"
version = "0.4.12" version = "0.4.12"
[[Netpbm]] [[Netpbm]]
deps = ["FileIO", "ImageCore"] deps = ["FileIO", "ImageCore", "ImageMetadata"]
git-tree-sha1 = "18efc06f6ec36a8b801b23f076e3c6ac7c3bf153" git-tree-sha1 = "5ae7ca23e13855b3aba94550f26146c01d259267"
uuid = "f09324ee-3d7c-5217-9330-fc30815ba969" uuid = "f09324ee-3d7c-5217-9330-fc30815ba969"
version = "1.0.2" version = "1.1.0"
[[Nettle]] [[Nettle]]
deps = ["Libdl", "Nettle_jll"] deps = ["Libdl", "Nettle_jll"]
@ -1607,12 +1607,6 @@ version = "3.7.2+0"
[[NetworkOptions]] [[NetworkOptions]]
uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908"
[[NonlinearSolve]]
deps = ["ArrayInterfaceCore", "FiniteDiff", "ForwardDiff", "IterativeSolvers", "LinearAlgebra", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "SciMLBase", "Setfield", "StaticArrays", "UnPack"]
git-tree-sha1 = "a754a21521c0ab48d37f44bbac1eefd1387bdcfc"
uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec"
version = "0.3.22"
[[Observables]] [[Observables]]
git-tree-sha1 = "6862738f9796b3edc1c09d0890afce4eca9e7e93" git-tree-sha1 = "6862738f9796b3edc1c09d0890afce4eca9e7e93"
uuid = "510215fc-4207-5dde-b226-833fc4488ee2" uuid = "510215fc-4207-5dde-b226-833fc4488ee2"
@ -1682,9 +1676,9 @@ version = "0.5.5+0"
[[Optim]] [[Optim]]
deps = ["Compat", "FillArrays", "ForwardDiff", "LineSearches", "LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "PositiveFactorizations", "Printf", "SparseArrays", "StatsBase"] deps = ["Compat", "FillArrays", "ForwardDiff", "LineSearches", "LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "PositiveFactorizations", "Printf", "SparseArrays", "StatsBase"]
git-tree-sha1 = "b9fe76d1a39807fdcf790b991981a922de0c3050" git-tree-sha1 = "1903afc76b7d01719d9c30d3c7d501b61db96721"
uuid = "429524aa-4258-5aef-a3af-852621145aeb" uuid = "429524aa-4258-5aef-a3af-852621145aeb"
version = "1.7.3" version = "1.7.4"
[[Opus_jll]] [[Opus_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
@ -1698,10 +1692,10 @@ uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d"
version = "1.4.1" version = "1.4.1"
[[OrdinaryDiffEq]] [[OrdinaryDiffEq]]
deps = ["Adapt", "ArrayInterface", "ArrayInterfaceCore", "ArrayInterfaceGPUArrays", "ArrayInterfaceStaticArrays", "ArrayInterfaceStaticArraysCore", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SnoopPrecompile", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] deps = ["Adapt", "ArrayInterface", "ArrayInterfaceCore", "ArrayInterfaceGPUArrays", "ArrayInterfaceStaticArrays", "ArrayInterfaceStaticArraysCore", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "Polyester", "PreallocationTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SnoopPrecompile", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"]
git-tree-sha1 = "7fff85e9569a5b7d11feffa88025cabf2358dddc" git-tree-sha1 = "cfb874fa0336429cd6a057be0b1de1f125048c8c"
uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed"
version = "6.31.2" version = "6.35.0"
[[PCRE2_jll]] [[PCRE2_jll]]
deps = ["Artifacts", "Libdl"] deps = ["Artifacts", "Libdl"]
@ -1790,9 +1784,9 @@ version = "1.3.1"
[[Plots]] [[Plots]]
deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SnoopPrecompile", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"] deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SnoopPrecompile", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"]
git-tree-sha1 = "5955a002262c08ab155ed2a6f1bb0787fedf5939" git-tree-sha1 = "6a9521b955b816aa500462951aa67f3e4467248a"
uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
version = "1.36.2" version = "1.36.6"
[[PoissonRandom]] [[PoissonRandom]]
deps = ["Random"] deps = ["Random"]
@ -1802,9 +1796,9 @@ version = "0.4.3"
[[Polyester]] [[Polyester]]
deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StrideArraysCore", "ThreadingUtilities"] deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StrideArraysCore", "ThreadingUtilities"]
git-tree-sha1 = "cb2ede4b9cc432c1cba4d4452a62ae1d2a4141bb" git-tree-sha1 = "7446b311ce8f2c3f48be75a2c4b53ff02dd0c1df"
uuid = "f517fe37-dbe3-4b94-8317-1923a5111588" uuid = "f517fe37-dbe3-4b94-8317-1923a5111588"
version = "0.6.16" version = "0.6.18"
[[PolyesterWeave]] [[PolyesterWeave]]
deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"] deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"]
@ -1838,9 +1832,9 @@ version = "0.7.1"
[[Poppler_jll]] [[Poppler_jll]]
deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "Glib_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "OpenJpeg_jll", "Pkg", "libpng_jll"] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "Glib_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "OpenJpeg_jll", "Pkg", "libpng_jll"]
git-tree-sha1 = "e11443687ac151ac6ef6699eb75f964bed8e1faa" git-tree-sha1 = "02148a0cb2532f22c0589ceb75c110e168fb3d1f"
uuid = "9c32591e-4766-534b-9725-b71a8799265b" uuid = "9c32591e-4766-534b-9725-b71a8799265b"
version = "0.87.0+2" version = "21.9.0+0"
[[PositiveFactorizations]] [[PositiveFactorizations]]
deps = ["LinearAlgebra"] deps = ["LinearAlgebra"]
@ -1862,9 +1856,9 @@ version = "1.3.0"
[[PrettyTables]] [[PrettyTables]]
deps = ["Crayons", "Formatting", "LaTeXStrings", "Markdown", "Reexport", "StringManipulation", "Tables"] deps = ["Crayons", "Formatting", "LaTeXStrings", "Markdown", "Reexport", "StringManipulation", "Tables"]
git-tree-sha1 = "d8ed354439950b34ab04ff8f3dfd49e11bc6c94b" git-tree-sha1 = "96f6db03ab535bdb901300f88335257b0018689d"
uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d"
version = "2.2.1" version = "2.2.2"
[[Primes]] [[Primes]]
deps = ["IntegerMathUtils"] deps = ["IntegerMathUtils"]
@ -1967,9 +1961,9 @@ version = "0.1.0"
[[RecipesBase]] [[RecipesBase]]
deps = ["SnoopPrecompile"] deps = ["SnoopPrecompile"]
git-tree-sha1 = "d12e612bba40d189cead6ff857ddb67bd2e6a387" git-tree-sha1 = "18c35ed630d7229c5584b945641a73ca83fb5213"
uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01"
version = "1.3.1" version = "1.3.2"
[[RecipesPipeline]] [[RecipesPipeline]]
deps = ["Dates", "NaNMath", "PlotUtils", "RecipesBase", "SnoopPrecompile"] deps = ["Dates", "NaNMath", "PlotUtils", "RecipesBase", "SnoopPrecompile"]
@ -1979,9 +1973,9 @@ version = "0.6.11"
[[RecursiveArrayTools]] [[RecursiveArrayTools]]
deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArraysCore", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "Tables", "ZygoteRules"] deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArraysCore", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "Tables", "ZygoteRules"]
git-tree-sha1 = "fe25988dce8dd3b763cf39d0ca39b09db3571ff7" git-tree-sha1 = "a5ce741acddc02f0d4fc6505463ca89697d7fb23"
uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd"
version = "2.32.1" version = "2.32.3"
[[RecursiveFactorization]] [[RecursiveFactorization]]
deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "SnoopPrecompile", "StrideArraysCore", "TriangularSolve"] deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "SnoopPrecompile", "StrideArraysCore", "TriangularSolve"]
@ -2069,9 +2063,9 @@ version = "0.1.0"
[[SLEEFPirates]] [[SLEEFPirates]]
deps = ["IfElse", "Static", "VectorizationBase"] deps = ["IfElse", "Static", "VectorizationBase"]
git-tree-sha1 = "938c9ecffb28338a6b8b970bda0f3806a65e7906" git-tree-sha1 = "c8679919df2d3c71f74451321f1efea6433536cc"
uuid = "476501e8-09a2-5ece-8869-fb82de89a1fa" uuid = "476501e8-09a2-5ece-8869-fb82de89a1fa"
version = "0.6.36" version = "0.6.37"
[[ScanByte]] [[ScanByte]]
deps = ["Libdl", "SIMD"] deps = ["Libdl", "SIMD"]
@ -2081,9 +2075,9 @@ version = "0.3.3"
[[SciMLBase]] [[SciMLBase]]
deps = ["ArrayInterfaceCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Preferences", "RecipesBase", "RecursiveArrayTools", "RuntimeGeneratedFunctions", "StaticArraysCore", "Statistics", "Tables"] deps = ["ArrayInterfaceCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Preferences", "RecipesBase", "RecursiveArrayTools", "RuntimeGeneratedFunctions", "StaticArraysCore", "Statistics", "Tables"]
git-tree-sha1 = "e1b587ea5933850d1ca2f52db31bd6bcbf50d4c1" git-tree-sha1 = "6a5c8e335e82b0c674bf74f7b45f005175b0cc5f"
uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
version = "1.72.0" version = "1.77.0"
[[ScikitLearnBase]] [[ScikitLearnBase]]
deps = ["LinearAlgebra", "Random", "Statistics"] deps = ["LinearAlgebra", "Random", "Statistics"]
@ -2105,9 +2099,9 @@ version = "1.3.16"
[[SequenceVariation]] [[SequenceVariation]]
deps = ["BioAlignments", "BioGenerics", "BioSequences", "BioSymbols"] deps = ["BioAlignments", "BioGenerics", "BioSequences", "BioSymbols"]
git-tree-sha1 = "b9ae7302c392646618848f6766c5584a9fbae770" git-tree-sha1 = "3ffa0ad2dd1534c407e82eea0eb53ee67c6357c2"
uuid = "eef6e190-9969-4f06-a38f-35a110a8fdc8" uuid = "eef6e190-9969-4f06-a38f-35a110a8fdc8"
version = "0.1.2" version = "0.1.3"
[[Serialization]] [[Serialization]]
uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b"
@ -2133,6 +2127,12 @@ git-tree-sha1 = "91eddf657aca81df9ae6ceb20b959ae5653ad1de"
uuid = "992d4aef-0814-514b-bc4d-f2e9a6c4116f" uuid = "992d4aef-0814-514b-bc4d-f2e9a6c4116f"
version = "1.0.3" version = "1.0.3"
[[SimpleNonlinearSolve]]
deps = ["ArrayInterfaceCore", "FiniteDiff", "ForwardDiff", "Reexport", "SciMLBase", "SnoopPrecompile", "StaticArraysCore"]
git-tree-sha1 = "7f3f0086731cb2eeb50b772389231dbc0b630ddb"
uuid = "727e6d20-b764-4bd8-a329-72de5adea6c7"
version = "0.1.2"
[[SimpleTraits]] [[SimpleTraits]]
deps = ["InteractiveUtils", "MacroTools"] deps = ["InteractiveUtils", "MacroTools"]
git-tree-sha1 = "5d7e3f4e11935503d3ecaf7186eac40602e7d231" git-tree-sha1 = "5d7e3f4e11935503d3ecaf7186eac40602e7d231"
@ -2189,15 +2189,15 @@ version = "0.1.1"
[[Static]] [[Static]]
deps = ["IfElse"] deps = ["IfElse"]
git-tree-sha1 = "03170c1e8a94732c1d835ce4c5b904b4b52cba1c" git-tree-sha1 = "0559586098f3cbd2e835461254ea2fcffa4a61ba"
uuid = "aedffcd0-7271-4cad-89d0-dc628f76c6d3" uuid = "aedffcd0-7271-4cad-89d0-dc628f76c6d3"
version = "0.7.8" version = "0.8.2"
[[StaticArrays]] [[StaticArrays]]
deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"]
git-tree-sha1 = "4e051b85454b4e4f66e6a6b7bdc452ad9da3dcf6" git-tree-sha1 = "ffc098086f35909741f71ce21d03dadf0d2bfa76"
uuid = "90137ffa-7385-5640-81b9-e52037218182" uuid = "90137ffa-7385-5640-81b9-e52037218182"
version = "1.5.10" version = "1.5.11"
[[StaticArraysCore]] [[StaticArraysCore]]
git-tree-sha1 = "6b7ba252635a5eff6a0b0664a41ee140a1c9e72a" git-tree-sha1 = "6b7ba252635a5eff6a0b0664a41ee140a1c9e72a"
@ -2222,9 +2222,9 @@ version = "0.33.21"
[[StatsFuns]] [[StatsFuns]]
deps = ["ChainRulesCore", "HypergeometricFunctions", "InverseFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"] deps = ["ChainRulesCore", "HypergeometricFunctions", "InverseFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"]
git-tree-sha1 = "5783b877201a82fc0014cbf381e7e6eb130473a4" git-tree-sha1 = "89a3bfe98f5400f4ff58bb5cd1a9e46f95d08352"
uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c"
version = "1.0.1" version = "1.1.0"
[[StatsModels]] [[StatsModels]]
deps = ["DataAPI", "DataStructures", "LinearAlgebra", "Printf", "REPL", "ShiftedArrays", "SparseArrays", "StatsBase", "StatsFuns", "Tables"] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "Printf", "REPL", "ShiftedArrays", "SparseArrays", "StatsBase", "StatsFuns", "Tables"]
@ -2240,21 +2240,21 @@ version = "0.15.4"
[[SteadyStateDiffEq]] [[SteadyStateDiffEq]]
deps = ["DiffEqBase", "DiffEqCallbacks", "LinearAlgebra", "NLsolve", "Reexport", "SciMLBase"] deps = ["DiffEqBase", "DiffEqCallbacks", "LinearAlgebra", "NLsolve", "Reexport", "SciMLBase"]
git-tree-sha1 = "f4492f790434f405139eb3a291fdbb45997857c6" git-tree-sha1 = "d06cb5c8f02490c85d46ec0ed303fd388941bd2e"
uuid = "9672c7b4-1e72-59bd-8a11-6ac3964bc41f" uuid = "9672c7b4-1e72-59bd-8a11-6ac3964bc41f"
version = "1.9.0" version = "1.9.1"
[[StochasticDiffEq]] [[StochasticDiffEq]]
deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqNoiseProcess", "DocStringExtensions", "FillArrays", "FiniteDiff", "ForwardDiff", "JumpProcesses", "LevyArea", "LinearAlgebra", "Logging", "MuladdMacro", "NLsolve", "OrdinaryDiffEq", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqNoiseProcess", "DocStringExtensions", "FillArrays", "FiniteDiff", "ForwardDiff", "JumpProcesses", "LevyArea", "LinearAlgebra", "Logging", "MuladdMacro", "NLsolve", "OrdinaryDiffEq", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"]
git-tree-sha1 = "20f5abeee0f8ceac168d39b1c59ab9752ed992a8" git-tree-sha1 = "43c1149ff76d6f55396331c5a565adcd2ed70b3c"
uuid = "789caeaf-c7a9-5a7d-9973-96adeb23e2a0" uuid = "789caeaf-c7a9-5a7d-9973-96adeb23e2a0"
version = "6.56.0" version = "6.57.3"
[[StrideArraysCore]] [[StrideArraysCore]]
deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "ThreadingUtilities"] deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "ThreadingUtilities"]
git-tree-sha1 = "38c07163835117036a9c05a849ae93c4b56d1d2b" git-tree-sha1 = "0b1ea3e3fdf93b42e9c0f58347168618b6acc259"
uuid = "7792a7ef-975c-4747-a70f-980b88e8d1da" uuid = "7792a7ef-975c-4747-a70f-980b88e8d1da"
version = "0.3.16" version = "0.3.17"
[[StringEncodings]] [[StringEncodings]]
deps = ["Libiconv_jll"] deps = ["Libiconv_jll"]
@ -2299,10 +2299,10 @@ deps = ["Artifacts", "Libdl", "OpenBLAS_jll"]
uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c" uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c"
[[Sundials]] [[Sundials]]
deps = ["CEnum", "DataStructures", "DiffEqBase", "Libdl", "LinearAlgebra", "Logging", "Reexport", "SnoopPrecompile", "SparseArrays", "Sundials_jll"] deps = ["CEnum", "DataStructures", "DiffEqBase", "Libdl", "LinearAlgebra", "Logging", "Reexport", "SciMLBase", "SnoopPrecompile", "SparseArrays", "Sundials_jll"]
git-tree-sha1 = "fc2fb8af952ffd007dfda02c08eaf9abb6081652" git-tree-sha1 = "ec007bb878acd31cc25d74d139dff5a9693127a3"
uuid = "c3572dad-4567-51f8-b174-8c6c989267f4" uuid = "c3572dad-4567-51f8-b174-8c6c989267f4"
version = "4.10.3" version = "4.11.1"
[[Sundials_jll]] [[Sundials_jll]]
deps = ["CompilerSupportLibraries_jll", "Libdl", "OpenBLAS_jll", "Pkg", "SuiteSparse_jll"] deps = ["CompilerSupportLibraries_jll", "Libdl", "OpenBLAS_jll", "Pkg", "SuiteSparse_jll"]
@ -2342,12 +2342,6 @@ version = "1.10.0"
deps = ["ArgTools", "SHA"] deps = ["ArgTools", "SHA"]
uuid = "a4e569a6-e804-4fa4-b0f3-eef7a1d5b13e" uuid = "a4e569a6-e804-4fa4-b0f3-eef7a1d5b13e"
[[Tectonic]]
deps = ["Pkg"]
git-tree-sha1 = "0b3881685ddb3ab066159b2ce294dc54fcf3b9ee"
uuid = "9ac5f52a-99c6-489f-af81-462ef484790f"
version = "0.8.0"
[[TensorCore]] [[TensorCore]]
deps = ["LinearAlgebra"] deps = ["LinearAlgebra"]
git-tree-sha1 = "1feb45f88d133a655e001435632f019a9a1bcdb6" git-tree-sha1 = "1feb45f88d133a655e001435632f019a9a1bcdb6"
@ -2356,9 +2350,9 @@ version = "0.1.1"
[[Term]] [[Term]]
deps = ["CodeTracking", "Dates", "Highlights", "InteractiveUtils", "Logging", "Markdown", "MyterialColors", "OrderedCollections", "Parameters", "ProgressLogging", "SnoopPrecompile", "Tables", "UUIDs", "UnicodeFun"] deps = ["CodeTracking", "Dates", "Highlights", "InteractiveUtils", "Logging", "Markdown", "MyterialColors", "OrderedCollections", "Parameters", "ProgressLogging", "SnoopPrecompile", "Tables", "UUIDs", "UnicodeFun"]
git-tree-sha1 = "d977137b9050a7762244eb25358429193fad438a" git-tree-sha1 = "eb5498a676b283594236e1e58a5f70f1f4e57ef6"
uuid = "22787eb5-b846-44ae-b979-8e399b8463ab" uuid = "22787eb5-b846-44ae-b979-8e399b8463ab"
version = "1.0.5" version = "1.0.6"
[[Test]] [[Test]]
deps = ["InteractiveUtils", "Logging", "Random", "Serialization"] deps = ["InteractiveUtils", "Logging", "Random", "Serialization"]
@ -2382,10 +2376,10 @@ uuid = "731e570b-9d59-4bfa-96dc-6df516fadf69"
version = "0.6.2" version = "0.6.2"
[[TikzPictures]] [[TikzPictures]]
deps = ["LaTeXStrings", "Poppler_jll", "Requires", "Tectonic"] deps = ["LaTeXStrings", "Poppler_jll"]
git-tree-sha1 = "4e75374d207fefb21105074100034236fceed7cb" git-tree-sha1 = "40d1559df48a5316eb66ad29ac734db6829e433d"
uuid = "37f6aa50-8035-52d0-81c2-5a1d08754b2d" uuid = "37f6aa50-8035-52d0-81c2-5a1d08754b2d"
version = "3.4.2" version = "3.2.0"
[[TiledIteration]] [[TiledIteration]]
deps = ["OffsetArrays"] deps = ["OffsetArrays"]
@ -2407,9 +2401,9 @@ version = "0.3.0"
[[TriangularSolve]] [[TriangularSolve]]
deps = ["CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "LoopVectorization", "Polyester", "SnoopPrecompile", "Static", "VectorizationBase"] deps = ["CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "LoopVectorization", "Polyester", "SnoopPrecompile", "Static", "VectorizationBase"]
git-tree-sha1 = "fdddcf6b2c7751cd97de69c18157aacc18fbc660" git-tree-sha1 = "9126e77b5d1afee9f94e8a66165e3716603d6054"
uuid = "d5829a12-d9aa-46ab-831f-fb7c9ab06edf" uuid = "d5829a12-d9aa-46ab-831f-fb7c9ab06edf"
version = "0.1.14" version = "0.1.15"
[[Tricks]] [[Tricks]]
git-tree-sha1 = "6bac775f2d42a611cdfcd1fb217ee719630c4175" git-tree-sha1 = "6bac775f2d42a611cdfcd1fb217ee719630c4175"
@ -2428,9 +2422,9 @@ uuid = "75842c30-9b2d-11e9-3f58-f17fe2b89951"
version = "0.2.0" version = "0.2.0"
[[URIs]] [[URIs]]
git-tree-sha1 = "e59ecc5a41b000fa94423a578d29290c7266fc10" git-tree-sha1 = "ac00576f90d8a259f2c9d823e91d1de3fd44d348"
uuid = "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4" uuid = "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4"
version = "1.4.0" version = "1.4.1"
[[UUIDs]] [[UUIDs]]
deps = ["Random", "SHA"] deps = ["Random", "SHA"]
@ -2452,15 +2446,15 @@ version = "0.4.1"
[[UnicodePlots]] [[UnicodePlots]]
deps = ["ColorSchemes", "ColorTypes", "Contour", "Crayons", "Dates", "FileIO", "FreeType", "LinearAlgebra", "MarchingCubes", "NaNMath", "Printf", "Requires", "SnoopPrecompile", "SparseArrays", "StaticArrays", "StatsBase", "Unitful"] deps = ["ColorSchemes", "ColorTypes", "Contour", "Crayons", "Dates", "FileIO", "FreeType", "LinearAlgebra", "MarchingCubes", "NaNMath", "Printf", "Requires", "SnoopPrecompile", "SparseArrays", "StaticArrays", "StatsBase", "Unitful"]
git-tree-sha1 = "21a1f739914158fa825f72df18e48597dbc97a38" git-tree-sha1 = "e20b01d50cd162593cfd9691628c830769f68987"
uuid = "b8865327-cd53-5732-bb35-84acbb429228" uuid = "b8865327-cd53-5732-bb35-84acbb429228"
version = "3.3.0" version = "3.3.1"
[[Unitful]] [[Unitful]]
deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"]
git-tree-sha1 = "bdc60e70c8a2f63626deeb5c177baacfc43f8a59" git-tree-sha1 = "d670a70dd3cdbe1c1186f2f17c9a68a7ec24838c"
uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" uuid = "1986cc42-f94f-5a68-af5c-568840ba703d"
version = "1.12.1" version = "1.12.2"
[[Unzip]] [[Unzip]]
git-tree-sha1 = "34db80951901073501137bdbc3d5a8e7bbd06670" git-tree-sha1 = "34db80951901073501137bdbc3d5a8e7bbd06670"
@ -2475,9 +2469,9 @@ version = "0.5.3"
[[VectorizationBase]] [[VectorizationBase]]
deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static"] deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static"]
git-tree-sha1 = "cc9c63ffd50f16a61a128c7d1e1cbfa441794b1a" git-tree-sha1 = "fc79d0f926592ecaeaee164f6a4ca81b51115c3b"
uuid = "3d5dd08c-fd9d-11e8-17fa-ed2836048c2f" uuid = "3d5dd08c-fd9d-11e8-17fa-ed2836048c2f"
version = "0.21.55" version = "0.21.56"
[[VertexSafeGraphs]] [[VertexSafeGraphs]]
deps = ["Graphs"] deps = ["Graphs"]
@ -2719,9 +2713,9 @@ version = "1.5.2+0"
[[Zygote]] [[Zygote]]
deps = ["AbstractFFTs", "ChainRules", "ChainRulesCore", "DiffRules", "Distributed", "FillArrays", "ForwardDiff", "GPUArrays", "GPUArraysCore", "IRTools", "InteractiveUtils", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "Random", "Requires", "SparseArrays", "SpecialFunctions", "Statistics", "ZygoteRules"] deps = ["AbstractFFTs", "ChainRules", "ChainRulesCore", "DiffRules", "Distributed", "FillArrays", "ForwardDiff", "GPUArrays", "GPUArraysCore", "IRTools", "InteractiveUtils", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "Random", "Requires", "SparseArrays", "SpecialFunctions", "Statistics", "ZygoteRules"]
git-tree-sha1 = "66cc604b9a27a660e25a54e408b4371123a186a6" git-tree-sha1 = "a6f1287943ac05fae56fa06049d1a7846dfbc65f"
uuid = "e88e6eb3-aa80-5325-afca-941959d7151f" uuid = "e88e6eb3-aa80-5325-afca-941959d7151f"
version = "0.6.49" version = "0.6.51"
[[ZygoteRules]] [[ZygoteRules]]
deps = ["MacroTools"] deps = ["MacroTools"]