mirror of
https://github.com/MillironX/docker-BioJulia.git
synced 2024-12-11 21:41:59 +00:00
Thomas A. Christensen II
aa4f228ae6
The code to get the BioSequences.jl version number
mistakenly pointed to ArgParse.jl, instead. Fix that.
Fixes: 647214f ("Add BioSequences version to tag name")
44 lines
1.6 KiB
YAML
44 lines
1.6 KiB
YAML
name: Update Packages
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on:
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schedule:
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- cron: "0 0 2,16 * *"
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workflow_dispatch:
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jobs:
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pkg_up:
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name: Update Packages
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runs-on: ubuntu-latest
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steps:
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- uses: actions/checkout@v2
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- uses: julia-actions/setup-julia@v1
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with:
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version: "1.6"
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- id: julia_ver
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run: |
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echo "::set-output name=version::$(julia -v | awk '{print $3}')"
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- run: |
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julia --project=${GITHUB_WORKSPACE} -e '
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using Pkg
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Pkg.instantiate()
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Pkg.update()'
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- id: biosequences_ver
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run: |
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echo "::set-output name=version::$(julia --project=${GITHUB_WORKSPACE} -e 'using Pkg, UUIDs; println(string(Pkg.dependencies()[UUID("7e6ae17a-c86d-528c-b3b9-7f778a29fe59")].version))')"
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- id: time
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uses: nanzm/get-time-action@v1.1
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with:
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format: "YYYY-MM-DD"
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- uses: devops-infra/action-commit-push@v0.9.0
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with:
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github_token: ${{ secrets.GH_PAK }}
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commit_message: "[⚡ AUTOMATED]: Pkg upgrade for ${{ steps.time.outputs.time }}"
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- id: hash
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run: |
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echo "::set-output name=short_hash::$(git rev-parse --short HEAD)"
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echo "::set-output name=long_hash::$(git rev-parse HEAD)"
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- uses: mathieudutour/github-tag-action@v6.0
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with:
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github_token: ${{ secrets.GH_PAK }}
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commit_sha: ${{ steps.hash.outputs.long_hash }}
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tag_prefix: ""
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custom_tag: ${{ steps.julia_ver.outputs.version }}-${{ steps.biosequences_ver.outputs.version }}-${{ steps.hash.outputs.short_hash }}
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