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Merge branch 'master' of github.com:MillironX/dotfiles

This commit is contained in:
Thomas A. Christensen II 2023-05-13 17:05:47 -05:00
commit 63d5bfcd6f
Signed by: millironx
GPG key ID: 09335146883990B9
9 changed files with 455 additions and 4 deletions

View file

@ -57,4 +57,4 @@ export JULIA_NUM_THREADS=$(nproc)
JULIA_PKG_USE_CLI_GIT=true
# Make NCBI happy
export NCBI_API_KEY='{{ (bitwarden "item" "7d42eba0-c256-4d3b-8d0e-adbf016a08f8").login.password }}'
export NCBI_API_KEY='{{ (bitwarden "item" "NCBI API Key").login.password }}'

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@ -0,0 +1,40 @@
<?xml version="1.0" encoding="utf-8"?>
<!--
BSD License
Copyright© 2013, Mapbox, LLC. All rights reserved.
Redistribution and use in source and binary forms, with or without modification,
are permitted provided that the following conditions are met:
* Redistributions of source code must retain the above copyright notice, this
list of conditions and the following disclaimer.
* Redistributions in binary form must reproduce the above copyright notice, this
list of conditions and the following disclaimer in the documentation and/or
other materials provided with the distribution.
* Neither the name of the Mapbox, LLC. nor the names of its
contributors may be used to endorse or promote products derived from this
software without specific prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR
ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON
ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
-->
<!-- Generator: Adobe Illustrator 20.0.0, SVG Export Plug-In . SVG Version: 6.00 Build 0) -->
<svg version="1.1" id="Icons" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink" x="0px" y="0px"
width="14px" height="14px" viewBox="0 0 14 14" enable-background="new 0 0 14 14" xml:space="preserve">
<g>
<polygon fill="#FFFFFF" points="0,5 0,6 13,1 13,0 "/>
<polygon fill="#FFFFFF" points="2,13 2,5 1,5 1,14 13,14 13,13 "/>
<polygon fill="#FFFFFF" points="4,12 5,12 5,11 5,9 6,10 6,11 6,12 7,12 7,10 6,9 9,9 9,12 10,12 10,8 11,6 13,6 11,4 8,7 4,7 "/>
</g>
</svg>

View file

@ -0,0 +1,41 @@
<?xml version="1.0" encoding="utf-8"?>
<!--
BSD License
Copyright© 2013, Mapbox, LLC. All rights reserved.
Redistribution and use in source and binary forms, with or without modification,
are permitted provided that the following conditions are met:
* Redistributions of source code must retain the above copyright notice, this
list of conditions and the following disclaimer.
* Redistributions in binary form must reproduce the above copyright notice, this
list of conditions and the following disclaimer in the documentation and/or
other materials provided with the distribution.
* Neither the name of the Mapbox, LLC. nor the names of its
contributors may be used to endorse or promote products derived from this
software without specific prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR
ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON
ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
-->
<!-- Generator: Adobe Illustrator 20.0.0, SVG Export Plug-In . SVG Version: 6.00 Build 0) -->
<svg version="1.1" id="Icons" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink" x="0px" y="0px"
width="22px" height="22px" viewBox="0 0 22 22" enable-background="new 0 0 22 22" xml:space="preserve">
<g>
<polygon fill="#FFFFFF" points="2,9 2,22 21,22 21,20 4,20 4,8 "/>
<polygon fill="#FFFFFF" points="0,8 0,9.5 21,1.5 21,0 "/>
<polygon fill="#FFFFFF" points="7,10 7,11 6,11 6,14 7,14 7,12 8,12 8,13 7,15 7,19 8,19 8,15 9,15 10,19 11,19 10,14 14,14 14,19 15,19 15,13
18,9 20,10 20,9 18,7 18,6 14,10 "/>
</g>
</svg>

View file

@ -0,0 +1,122 @@
<?xml version="1.0" encoding="UTF-8" standalone="no"?>
<!--
The Breeze Icon Theme in icons/
Copyright (C) 2014 Uri Herrera <uri_herrera@nitrux.in> and others
This library is free software; you can redistribute it and/or
modify it under the terms of the GNU Lesser General Public
License as published by the Free Software Foundation; either
version 3 of the License, or (at your option) any later version.
This library is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
Lesser General Public License for more details.
You should have received a copy of the GNU Lesser General Public
License along with this library. If not, see <http://www.gnu.org/licenses/>.
Clarification:
The GNU Lesser General Public License or LGPL is written for
software libraries in the first place. We expressly want the LGPL to
be valid for this artwork library too.
KDE Breeze theme icons is a special kind of software library, it is an
artwork library, it's elements can be used in a Graphical User Interface, or
GUI.
Source code, for this library means:
- where they exist, SVG;
- otherwise, if applicable, the multi-layered formats xcf or psd, or
otherwise png.
The LGPL in some sections obliges you to make the files carry
notices. With images this is in some cases impossible or hardly useful.
With this library a notice is placed at a prominent place in the directory
containing the elements. You may follow this practice.
The exception in section 5 of the GNU Lesser General Public License covers
the use of elements of this art library in a GUI.
https://vdesign.kde.org/
-->
<!--
BSD License
Copyright© 2013, Mapbox, LLC. All rights reserved.
Redistribution and use in source and binary forms, with or without modification,
are permitted provided that the following conditions are met:
* Redistributions of source code must retain the above copyright notice, this
list of conditions and the following disclaimer.
* Redistributions in binary form must reproduce the above copyright notice, this
list of conditions and the following disclaimer in the documentation and/or
other materials provided with the distribution.
* Neither the name of the Mapbox, LLC. nor the names of its
contributors may be used to endorse or promote products derived from this
software without specific prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR
ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON
ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
-->
<svg
viewBox="0 0 32 32"
version="1.1"
id="svg14"
xml:space="preserve"
xmlns="http://www.w3.org/2000/svg"
xmlns:svg="http://www.w3.org/2000/svg"><defs
id="defs3051"><style
type="text/css"
id="current-color-scheme">
.ColorScheme-Text {
color:#232629;
}
.ColorScheme-Highlight {
color:#3daee9;
}
</style></defs><path
style="fill:currentColor;fill-opacity:1;stroke:none"
d="M 2 3 L 2 10 L 1 10 L 1 29 L 12 29 L 13 29 L 31 29 L 31 8 L 30 8 L 30 5 L 16 5 L 14 3 L 2 3 z "
class="ColorScheme-Highlight"
id="path4" /><path
style="fill-opacity:0.33;fill-rule:evenodd"
d="m 2,3 0,7 9,0 L 13,8 30,8 30,5 16,5 14,3 2,3 Z"
id="path6" /><path
style="fill:#ffffff;fill-opacity:0.2;fill-rule:evenodd"
d="M 14 3 L 15 6 L 30 6 L 30 5 L 16 5 L 14 3 z M 13 8 L 11 10 L 1 10 L 1 11 L 12 11 L 13 8 z "
id="path8" /><path
style="fill-opacity:0.2;fill-rule:evenodd"
d="M 13 8 L 11 9 L 2 9 L 2 10 L 11 10 L 13 8 z M 1 28 L 1 29 L 31 29 L 31 28 L 1 28 z "
class="ColorScheme-Text"
id="path10" /><g
id="g474"
transform="translate(9.5,11.61374)"
style="fill:#2d5c75;fill-opacity:1">
<polygon
points="0,6 13,1 13,0 0,5 "
id="polygon468"
style="fill:#2d5c75;fill-opacity:1" />
<polygon
points="13,13 2,13 2,5 1,5 1,14 13,14 "
id="polygon470"
style="fill:#2d5c75;fill-opacity:1" />
<polygon
points="6,11 6,12 7,12 7,10 6,9 9,9 9,12 10,12 10,8 11,6 13,6 11,4 8,7 4,7 4,12 5,12 5,11 5,9 6,10 "
id="polygon472"
style="fill:#2d5c75;fill-opacity:1" />
</g></svg>

View file

@ -0,0 +1,122 @@
<?xml version="1.0" encoding="UTF-8" standalone="no"?>
<!--
The Breeze Icon Theme in icons/
Copyright (C) 2014 Uri Herrera <uri_herrera@nitrux.in> and others
This library is free software; you can redistribute it and/or
modify it under the terms of the GNU Lesser General Public
License as published by the Free Software Foundation; either
version 3 of the License, or (at your option) any later version.
This library is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
Lesser General Public License for more details.
You should have received a copy of the GNU Lesser General Public
License along with this library. If not, see <http://www.gnu.org/licenses/>.
Clarification:
The GNU Lesser General Public License or LGPL is written for
software libraries in the first place. We expressly want the LGPL to
be valid for this artwork library too.
KDE Breeze theme icons is a special kind of software library, it is an
artwork library, it's elements can be used in a Graphical User Interface, or
GUI.
Source code, for this library means:
- where they exist, SVG;
- otherwise, if applicable, the multi-layered formats xcf or psd, or
otherwise png.
The LGPL in some sections obliges you to make the files carry
notices. With images this is in some cases impossible or hardly useful.
With this library a notice is placed at a prominent place in the directory
containing the elements. You may follow this practice.
The exception in section 5 of the GNU Lesser General Public License covers
the use of elements of this art library in a GUI.
https://vdesign.kde.org/
-->
<!--
BSD License
Copyright© 2013, Mapbox, LLC. All rights reserved.
Redistribution and use in source and binary forms, with or without modification,
are permitted provided that the following conditions are met:
* Redistributions of source code must retain the above copyright notice, this
list of conditions and the following disclaimer.
* Redistributions in binary form must reproduce the above copyright notice, this
list of conditions and the following disclaimer in the documentation and/or
other materials provided with the distribution.
* Neither the name of the Mapbox, LLC. nor the names of its
contributors may be used to endorse or promote products derived from this
software without specific prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR
ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON
ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
-->
<svg
viewBox="0 0 48 48"
version="1.1"
id="svg1569"
xml:space="preserve"
xmlns="http://www.w3.org/2000/svg"
xmlns:svg="http://www.w3.org/2000/svg"><defs
id="defs3051"><style
type="text/css"
id="current-color-scheme">
.ColorScheme-Text {
color:#31363b;
}
.ColorScheme-Highlight {
color:#3daee9;
}
</style></defs><path
style="fill:currentColor;fill-opacity:1;stroke:none"
d="M 5,6 V 16 H 4 V 42 H 44 V 13 H 43 V 9 H 24 L 21,6 Z"
class="ColorScheme-Highlight"
id="path1559" /><path
style="fill-opacity:0.33;fill-rule:evenodd"
d="m 5,6 v 10 h 12 l 3,-3 H 43 V 9 H 24 L 21,6 Z"
id="path1561" /><path
style="fill:#ffffff;fill-opacity:0.2;fill-rule:evenodd"
d="M 21 6 L 23 10 L 43 10 L 43 9 L 24 9 L 21 6 z M 20 13 L 17 16 L 4 16 L 4 17 L 18 17 L 20 13 z "
id="path1563" /><path
style="fill-opacity:0.2;fill-rule:evenodd"
d="M 20 13 L 16 15 L 5 15 L 5 16 L 17 16 L 20 13 z M 4 41 L 4 42 C 4 42 44 42 44 42 L 44 41 L 4 41 z "
class="ColorScheme-Text"
id="path1565" /><g
id="g1748"
transform="translate(13.5,15.015267)"
style="fill:#356680;fill-opacity:1">
<polygon
points="4,20 4,8 2,9 2,22 21,22 21,20 "
id="polygon1742"
style="fill:#356680;fill-opacity:1" />
<polygon
points="0,8 0,9.5 21,1.5 21,0 "
id="polygon1744"
style="fill:#356680;fill-opacity:1" />
<polygon
points="7,14 7,12 8,12 8,13 7,15 7,19 8,19 8,15 9,15 10,19 11,19 10,14 14,14 14,19 15,19 15,13 18,9 20,10 20,9 18,7 18,6 14,10 7,10 7,11 6,11 6,14 "
id="polygon1746"
style="fill:#356680;fill-opacity:1" />
</g></svg>

View file

@ -0,0 +1,122 @@
<?xml version="1.0" encoding="UTF-8" standalone="no"?>
<!--
The Breeze Icon Theme in icons/
Copyright (C) 2014 Uri Herrera <uri_herrera@nitrux.in> and others
This library is free software; you can redistribute it and/or
modify it under the terms of the GNU Lesser General Public
License as published by the Free Software Foundation; either
version 3 of the License, or (at your option) any later version.
This library is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
Lesser General Public License for more details.
You should have received a copy of the GNU Lesser General Public
License along with this library. If not, see <http://www.gnu.org/licenses/>.
Clarification:
The GNU Lesser General Public License or LGPL is written for
software libraries in the first place. We expressly want the LGPL to
be valid for this artwork library too.
KDE Breeze theme icons is a special kind of software library, it is an
artwork library, it's elements can be used in a Graphical User Interface, or
GUI.
Source code, for this library means:
- where they exist, SVG;
- otherwise, if applicable, the multi-layered formats xcf or psd, or
otherwise png.
The LGPL in some sections obliges you to make the files carry
notices. With images this is in some cases impossible or hardly useful.
With this library a notice is placed at a prominent place in the directory
containing the elements. You may follow this practice.
The exception in section 5 of the GNU Lesser General Public License covers
the use of elements of this art library in a GUI.
https://vdesign.kde.org/
-->
<!--
BSD License
Copyright© 2013, Mapbox, LLC. All rights reserved.
Redistribution and use in source and binary forms, with or without modification,
are permitted provided that the following conditions are met:
* Redistributions of source code must retain the above copyright notice, this
list of conditions and the following disclaimer.
* Redistributions in binary form must reproduce the above copyright notice, this
list of conditions and the following disclaimer in the documentation and/or
other materials provided with the distribution.
* Neither the name of the Mapbox, LLC. nor the names of its
contributors may be used to endorse or promote products derived from this
software without specific prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR
ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON
ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
-->
<svg
viewBox="0 0 64 64"
version="1.1"
id="svg2091"
xml:space="preserve"
xmlns="http://www.w3.org/2000/svg"
xmlns:svg="http://www.w3.org/2000/svg"><defs
id="defs3051"><style
type="text/css"
id="current-color-scheme">
.ColorScheme-Text {
color:#232629;
}
.ColorScheme-Highlight {
color:#3daee9;
}
</style></defs><path
style="fill:currentColor"
d="M 4 6 L 4 11 L 4 20 L 3 20 L 3 21 L 3 21 C 3 21 3 21 3 21 L 3 57 L 3 58 L 4 58 L 60 58 L 61 58 L 61 57 L 61 21 L 61 21 L 61 16 L 60 16 L 60 11 C 60 11 60 11 60 11 L 60 11 L 60 10 L 32 10 L 28 6 L 4 6 z "
class="ColorScheme-Highlight"
id="path2081" /><path
style="fill-opacity:0.33"
d="M 4 6 L 4 11 L 4 20 L 22 20 L 26 16 L 60 16 L 60 11 C 60 11 60 11 60 11 L 60 11 L 60 10 L 32 10 L 28 6 L 4 6 z "
id="path2083" /><path
style="fill:#ffffff;fill-opacity:0.2"
d="M 28 6 L 31 11 L 33 11 L 60 11 L 60 10 L 33 10 L 32 10 L 28 6 z M 26 16 L 22 20 L 3 20 L 3 21 L 23 21 L 26 16 z "
id="path2085" /><path
style="fill-opacity:0.2;fill-rule:evenodd"
d="M 26 16 L 20 19 L 4 19 L 4 20 L 22 20 L 26 16 z M 3 57 L 3 58 L 4 58 L 60 58 L 61 58 L 61 57 L 60 57 L 4 57 L 3 57 z "
class="ColorScheme-Text"
id="path2087" /><g
id="g2270"
transform="translate(17,18.416794)"
style="fill:#2d5c75;fill-opacity:1">
<polygon
points="29,30 3,30 3,11.5 6,10.5 6,12 6,27 29,27 "
id="polygon2264"
style="fill:#2d5c75;fill-opacity:1" />
<polygon
points="1,10 1,12.5 29,2.5 29,0 "
id="polygon2266"
style="fill:#2d5c75;fill-opacity:1" />
<polygon
points="9,14 8,16 8,19 9,19 9,16 10,15 10,19 9,20 9,24 10,25 11,24 11,20 12,20 15,25 16,25 14,19 19,19 19,23 20,25 21,23 21,17 22,15 25,15 25,14 22.5,14 23,13 25,13 25,14 26,14 26,13 27,12 24,10 24,8 22,10 18,14 "
id="polygon2268"
style="fill:#2d5c75;fill-opacity:1" />
</g></svg>

View file

@ -1,7 +1,7 @@
{{ if ne .machinetype "workstation" }}
tower {
enabled = true
accessToken = '{{ (bitwarden "item" "d41ac952-d8b5-4d20-a42a-ad8e0174d152").login.password }}'
accessToken = '{{ (bitwarden "item" "Nextflow Tower Access Token").login.password }}'
}
{{ end }}

View file

@ -1,6 +1,6 @@
providers {
github {
user = '{{ .githubuser }}'
password = '{{ (bitwarden "item" "3e123829-7167-4dd2-8f3f-ad8f01081fee").login.password }}'
password = '{{ (bitwarden "item" "GitHub Nextflow Token").login.password }}'
}
}

View file

@ -2,8 +2,12 @@ Host *
IdentitiesOnly yes
IdentityFile {{ if and (eq .machinetype "workstation") (ne .chezmoi.os "windows") }}~/.ssh/id_rsa_yubikey.pub{{ else }}~/.ssh/id_ed25519{{ end }}
Host anderson
HostName anderson.millironx.com
User millironx
Host aahz
HostName 129.130.108.37
HostName nistac-108-37.dhcp.ksu.edu
User tchristensen
Host skeeve