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dotfiles/dot_nextflow/config.tmpl
Thomas A. Christensen II 1371471497
Use scratch spaces when using SCINet
Signed-off-by: Thomas A. Christensen II <25492070+MillironX@users.noreply.github.com>
2021-12-02 11:28:09 -06:00

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Cheetah

tower {
enabled = true
accessToken = '{{ (bitwarden "item" "d41ac952-d8b5-4d20-a42a-ad8e0174d152").login.password }}'
}
{{ if (eq .cluster "scinet") }}
process {
scratch = true
executor = 'slurm'
clusterOptions = '--account=fabadru'
{{ if (or (eq .chezmoi.hostname "Atlas-login-1") (eq .chezmoi.hostname "Atlas-login-2")) }}
withLabel: process_high_memory {
queue = 'bigmem'
}
{{ end }}
{{ if (eq .chezmoi.hostname "ceres") }}
withLabel: process_high_memory {
queue = 'mem'
}
withLabel: process_long {
queue = 'long'
}
{{ end }}
}
{{ end }}