diff --git a/main.nf b/main.nf index 81346f4..17096eb 100755 --- a/main.nf +++ b/main.nf @@ -1,5 +1,7 @@ #!/usr/bin/env nextflow +include { validateParameters } from 'plugin/nf-validation' + include { CLIQUESNV } from './modules/cliquesnv' include { EFETCH } from './modules/efetch' include { HAPLINK_HAPLOTYPES as HAPLINK_ML_HAPLOTYPES } from './modules/haplink/haplotypes' @@ -15,6 +17,8 @@ include { VIQUAS } from './modules/viquas' workflow { + validateParameters() + Channel .fromPath("*.fastq.gz") .map { file -> tuple(file.simpleName, file) }