From a91632a88329c4a4c9682bcea48168840e8d487a Mon Sep 17 00:00:00 2001
From: "Thomas A. Christensen II" <25492070+MillironX@users.noreply.github.com>
Date: Sat, 19 Aug 2023 14:36:51 -0500
Subject: [PATCH] feat: Force containerized R environments

---
 nextflow.config | 7 +++++++
 1 file changed, 7 insertions(+)

diff --git a/nextflow.config b/nextflow.config
index abcd8d3..84597cb 100644
--- a/nextflow.config
+++ b/nextflow.config
@@ -2,3 +2,10 @@ process {
     errorStrategy = 'finish'
     time = '7d'
 }
+
+singularity.enabled = true
+
+env {
+    R_PROFILE_USER   = "/.Rprofile"
+    R_ENVIRON_USER   = "/.Renviron"
+}