From ec4414184b442c354968e2b11d55d128270a43e1 Mon Sep 17 00:00:00 2001
From: "Thomas A. Christensen II" <25492070+MillironX@users.noreply.github.com>
Date: Sat, 23 Sep 2023 15:39:21 -0500
Subject: [PATCH] refactor: Change output file name of EFETCH

---
 modules/efetch/main.nf | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/modules/efetch/main.nf b/modules/efetch/main.nf
index 66272fd..ed38458 100644
--- a/modules/efetch/main.nf
+++ b/modules/efetch/main.nf
@@ -9,7 +9,7 @@ process EFETCH {
     publishDir "results", mode: 'copy'
 
     output:
-    path 'idv4.fasta'
+    path 'reference.fasta'
 
     script:
     """
@@ -18,6 +18,6 @@ process EFETCH {
             -query "${genome}" \\
         | efetch \\
             -format fasta \\
-        > idv4.fasta
+        > reference.fasta
     """
 }