From eddf9d21f6817f9ea9b96a3c77d1067bbac4afe7 Mon Sep 17 00:00:00 2001
From: "Thomas A. Christensen II" <25492070+MillironX@users.noreply.github.com>
Date: Wed, 18 Oct 2023 21:56:44 -0500
Subject: [PATCH] refactor: Change hard-coded reference into parameter

---
 main.nf | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/main.nf b/main.nf
index 045da7b..81346f4 100755
--- a/main.nf
+++ b/main.nf
@@ -20,7 +20,7 @@ workflow {
         .map { file -> tuple(file.simpleName, file) }
         .set { ch_input }
 
-    EFETCH('NC_036618.1')
+    EFETCH("${params.reference}")
     EFETCH
         .out
         .set { ch_reference }