2021-09-28 10:08:27 +00:00
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params {
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config_profile_name = 'ALICE'
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config_profile_description = 'Profile for use on Academic Leiden Interdisciplinary Cluster Environment (ALICE).'
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config_profile_contact = 'Bjorn Peare Bartholdy (@osteobjorn)'
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2021-09-28 11:34:12 +00:00
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config_profile_url = 'https://wiki.alice.universiteitleiden.nl/'
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2021-09-28 10:08:27 +00:00
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max_cpus = 24
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max_memory = 240.GB
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max_time = 168.h
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}
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process {
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executor = 'slurm'
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queue = { task.time < 3.h ? 'cpu-short' : task.time < 24.h ? 'cpu-medium' : 'cpu-long' }
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}
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singularity {
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enabled = true
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autoMounts = true
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}
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// Preform work directory cleanup after a successful run
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cleanup = true
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// Profile to deactivate automatic cleanup of work directory after a successful run. Overwrites cleanup option.
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profiles {
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mem {
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params {
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max_cpus = 24
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max_memory = 2.TB
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max_time = 336.h
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}
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process {
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queue = 'mem'
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}
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}
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debug {
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cleanup = false
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}
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}
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