1
0
Fork 0
mirror of https://github.com/MillironX/nf-configs.git synced 2024-12-24 11:08:17 +00:00
nf-configs/conf/pipeline/sarek/munin.config

23 lines
668 B
Text
Raw Normal View History

// Profile config names for nf-core/configs
params {
// Specific nf-core/configs params
config_profile_contact = 'Maxime Garcia (@MaxUlysse)'
config_profile_description = 'nf-core/sarek MUNIN profile provided by nf-core/configs'
// Specific nf-core/sarek params
annotation_cache = true
pon = '/data1/PON/vcfs/BTB.PON.vcf.gz'
pon_index = '/data1/PON/vcfs/BTB.PON.vcf.gz.tbi'
snpEff_cache = '/data1/cache/snpEff/'
vep_cache = '/data1/cache/VEP/'
}
2019-11-20 15:03:27 +00:00
// Specific nf-core/sarek process configuration
process {
withLabel:sentieon {
2019-12-12 10:50:10 +00:00
module = {params.sentieon ? 'sentieon/201808.05' : null}
container = {params.sentieon ? null : container}
2019-11-20 15:03:27 +00:00
}
}