nf-configs/docs/pipeline/ampliseq/uppmax.md

# nf-core/configs: uppmax ampliseq specific configuration

Extra specific configuration for the ampliseq pipeline.

## Usage

To use, run the pipeline with `-profile uppmax`.

This will download and launch the ampliseq specific [`uppmax.config`](../../../conf/pipeline/ampliseq/uppmax.config) which has been pre-configured with a setup suitable for the UPPMAX cluster.

Example: `nextflow run nf-core/ampliseq -profile uppmax`

## ampliseq specific configurations for uppmax

Specific configurations for UPPMAX has been made for ampliseq.

- Makes sure that a fat node is allocated for training and applying a Bayesian classifier.
Adding UPPMAX specific config for ampliseq 2020-03-31 13:17:24 +00:00			`# nf-core/configs: uppmax ampliseq specific configuration`

			`Extra specific configuration for the ampliseq pipeline.`

			`## Usage`

			To use, run the pipeline with `-profile uppmax`.

			This will download and launch the ampliseq specific [`uppmax.config`](../../../conf/pipeline/ampliseq/uppmax.config) which has been pre-configured with a setup suitable for the UPPMAX cluster.

			Example: `nextflow run nf-core/ampliseq -profile uppmax`

			`## ampliseq specific configurations for uppmax`

			`Specific configurations for UPPMAX has been made for ampliseq.`

style: Run prettier 2022-03-17 23:33:31 +00:00			`- Makes sure that a fat node is allocated for training and applying a Bayesian classifier.`