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nf-configs/conf/pasteur.config

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2019-07-24 09:32:02 +00:00
//Profile config names for nf-core/configs
params {
config_profile_description = 'The Institut Pasteur HPC cluster profile'
config_profile_contact = 'Remi Planel (@rplanel)'
config_profile_url = 'https://research.pasteur.fr/en/service/tars-cluster/'
}
singularity {
enabled = true
autoMounts = true
runOptions = '-B /local/scratch:/tmp'
}
process {
executor = 'slurm'
clusterOptions = { "-A $params.project ${params.clusterOptions ?: ''}" }
}
params {
igenomesIgnore = true
max_memory = 256.GB
max_cpus = 28
max_time = 24.h
}