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27 lines
742 B
Text
27 lines
742 B
Text
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//Profile config names for nf-core/configs
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params {
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config_profile_description = 'A*STAR Aquila cluster profile provided by nf-core/configs.'
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config_profile_contact = 'Andreas Wilm (@andreas-wilm)'
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config_profile_url = 'https://www.a-star.edu.sg/'
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}
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singularity {
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enabled = true
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}
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process {
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beforeScript = { 'source /mnt/projects/rpd/rc/init.2017-04; module load miniconda3; set +u; source activate ' + params.container.replaceAll(/[\/:]/, '-').replaceAll(/nfcore/, 'nf-core') + "; set -u;" }
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executor = 'sge'
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clusterOptions = { "-l mem_free=" + task.memory.toString().replaceAll(/[\sB]/,'') }
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penv = 'OpenMP'
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}
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params {
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igenomes_base = '/nfsmounts/igenomes'
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max_memory = 128.GB
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max_cpus = 28
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max_time = 48.h
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}
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