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nf-configs/conf/rosalind.config

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params {
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config_profile_description = 'Kings College London Rosalind HPC'
config_profile_contact = 'Theo Portlock'
config_profile_url = 'https://www.rosalind.kcl.ac.uk/'
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}
singularity {
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enabled = true
autoMounts = true
docker.enabled = false
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}
params {
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max_memory = 64.GB
max_cpus = 16
max_time = 24.h
partition = 'shared'
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schema_ignore_params = 'partition,genomes,modules'
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}
process {
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executor = 'slurm'
maxRetries = 3
clusterOptions = { "--partition=$params.partition" }
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}
executor {
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submitRateLimit = '1 sec'
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}