nf-configs/docs/pipeline/ampliseq/binac.md

# nf-core/configs: binac ampliseq specific configuration

Extra specific configuration for the ampliseq pipeline.

## Usage

To use, run the pipeline with `-profile binac`.

This will download and launch the ampliseq specific [`binac.config`](../../../conf/pipeline/ampliseq/binac.config) which has been pre-configured with a setup suitable for the BINAC cluster.

Example: `nextflow run nf-core/ampliseq -profile binac`

## ampliseq specific configurations for binac

Specific configurations for BINAC has been made for ampliseq.

* Specifies the `TZ` `ENV` variable to be `Europe/Berlin` to fix a QIIME2 issue
Adjust custom pipeline config for ampliseq on BINAC 2019-12-11 10:09:44 -05:00			`# nf-core/configs: binac ampliseq specific configuration`

			`Extra specific configuration for the ampliseq pipeline.`

			`## Usage`

			To use, run the pipeline with `-profile binac`.

fix path to config files 2020-03-11 09:11:23 -04:00			This will download and launch the ampliseq specific [`binac.config`](../../../conf/pipeline/ampliseq/binac.config) which has been pre-configured with a setup suitable for the BINAC cluster.
Adjust custom pipeline config for ampliseq on BINAC 2019-12-11 10:09:44 -05:00
			Example: `nextflow run nf-core/ampliseq -profile binac`

			`## ampliseq specific configurations for binac`

			`Specific configurations for BINAC has been made for ampliseq.`

			* Specifies the `TZ` `ENV` variable to be `Europe/Berlin` to fix a QIIME2 issue