2019-12-12 08:44:37 -05:00
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//Nextflow config file for running on AWS batch
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params {
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config_profile_description = 'AWSBATCH Cloud Profile'
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config_profile_contact = 'Alexander Peltzer (@apeltzer)'
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config_profile_url = 'https://aws.amazon.com/batch/'
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awsqueue = false
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awsregion = 'eu-west-1'
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awscli = '/home/ec2-user/miniconda/bin/aws'
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2020-11-09 16:41:38 -05:00
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}
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timeline {
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overwrite = true
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}
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report {
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overwrite = true
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}
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trace {
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overwrite = true
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}
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dag {
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overwrite = true
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2019-12-12 08:44:37 -05:00
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}
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process.executor = 'awsbatch'
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process.queue = params.awsqueue
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aws.region = params.awsregion
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2021-02-09 16:06:59 -05:00
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aws.batch.cliPath = params.awscli
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