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# nf-core/configs: uppmax sarek specific configuration
Extra specific configuration for sarek pipeline
## Usage
To use, run the pipeline with `-profile uppmax` .
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This will download and launch the sarek specific [`uppmax.config` ](../../../conf/pipeline/sarek/uppmax.config ) which has been pre-configured with a setup suitable for uppmax clusters.
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Example: `nextflow run nf-core/sarek -profile uppmax`
## Sarek specific configurations for uppmax clusters
Specific configurations for uppmax clusters has been made for sarek.
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- Set paths to reference genomes
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- Override resource requirements for MapReads on `miarka`
