1
0
Fork 0
mirror of https://github.com/MillironX/nf-configs.git synced 2024-11-22 08:29:54 +00:00
nf-configs/conf/unibe_ibu.config

23 lines
501 B
Text
Raw Normal View History

2021-05-19 07:46:07 +00:00
params {
2021-05-20 08:53:35 +00:00
config_profile_description = "University of Bern, Interfaculty Bioinformatics Unit cluster profile"
2021-05-19 07:46:07 +00:00
config_profile_contact = "irene.keller@dbmr.unibe.ch; info@bioinformatics.unibe.ch"
config_profile_url = "https://www.bioinformatics.unibe.ch/"
max_memory = 500.GB
max_cpus = 128
2021-05-20 11:52:13 +00:00
max_time = 240.h
2021-05-19 07:46:07 +00:00
}
process {
2021-05-20 08:53:35 +00:00
executor = "slurm"
2021-05-19 07:46:07 +00:00
maxRetries = 2
beforeScript = 'mkdir -p ./tmp/ && export TMPDIR=./tmp/'
}
executor {
2021-05-20 08:53:35 +00:00
queueSize = 30
2021-05-19 07:46:07 +00:00
}
singularity {
2021-05-20 11:44:59 +00:00
enabled = true
autoMounts = true
2021-05-19 07:46:07 +00:00
}