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18 lines
827 B
Text
18 lines
827 B
Text
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// scflow/imperial specific profile config
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params {
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// Config Params
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config_profile_description = 'Imperial College London - HPC - nf-core/scFlow Profile -- provided by nf-core/configs.'
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config_profile_contact = 'Combiz Khozoie (c.khozoie@imperial.ac.uk)'
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// Analysis Resource Params
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ctd_folder = "/rds/general/user/$USER/projects/ukdrmultiomicsproject/live/Analyses/scFlowResources/refs/ctd"
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ensembl_mappings = "/rds/general/user/$USER/projects/ukdrmultiomicsproject/live/Analyses/scFlowResources/src/ensembl-ids/ensembl_mappings.tsv"
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}
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singularity {
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enabled = true
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autoMounts = true
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cacheDir = "/rds/general/user/$USER/projects/ukdrmultiomicsproject/live/.singularity-cache"
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runOptions = "-B /rds/,/rdsgpfs/,/rds/general/user/$USER/ephemeral/tmp/:/tmp,/rds/general/user/$USER/ephemeral/tmp/:/var/tmp"
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}
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