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nf-configs/conf/unibe_ibu.config

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params {
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config_profile_description = "University of Bern, Interfaculty Bioinformatics Unit cluster profile"
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config_profile_contact = "irene.keller@dbmr.unibe.ch; info@bioinformatics.unibe.ch"
config_profile_url = "https://www.bioinformatics.unibe.ch/"
max_memory = 500.GB
max_cpus = 128
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max_time = 240.h
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}
process {
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executor = "slurm"
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maxRetries = 2
beforeScript = 'mkdir -p ./tmp/ && export TMPDIR=./tmp/'
}
executor {
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queueSize = 30
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}
singularity {
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enabled = true
autoMounts = true
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}