nf-configs/conf/pipeline/sarek/uppmax.config

// sarek/uppmax specific profile config

params {
  config_profile_contact = 'Maxime Garcia (@MaxUlysse)'
  config_profile_description = 'nf-core/sarek uppmax profile provided by nf-core/configs'
}

if (hostname ==~ "i.*") {
  singularity {
      cacheDir = params.containers_path
  }
}

params {
  igenomeIgnore = true
  genomes_base = params.genome == 'GRCh37' ? '/sw/data/uppnex/ToolBox/ReferenceAssemblies/hg38make/bundle/2.8/b37' : '/sw/data/uppnex/ToolBox/hg38bundle'
}