nf-configs/conf/pipeline/viralrecon/genomes.config

/*
 * -------------------------------------------------
 *  nfcore/viralrecon custom profile Nextflow config file
 * -------------------------------------------------
 * Defines viral reference genomes for all environments.
 */
 
params {
  // Genome reference file paths
  genomes {
    'NC_045512.2' {
      fasta = "https://raw.githubusercontent.com/nf-core/test-datasets/viralrecon/genome/NC_045512.2/GCF_009858895.2_ASM985889v3_genomic.200409.fna.gz"
      gff   = "https://raw.githubusercontent.com/nf-core/test-datasets/viralrecon/genome/NC_045512.2/GCF_009858895.2_ASM985889v3_genomic.200409.gff.gz"
    }
    'MN908947.3' {
      fasta = "https://raw.githubusercontent.com/nf-core/test-datasets/viralrecon/genome/MN908947.3/GCA_009858895.3_ASM985889v3_genomic.200409.fna.gz"
      gff   = "https://raw.githubusercontent.com/nf-core/test-datasets/viralrecon/genome/MN908947.3/GCA_009858895.3_ASM985889v3_genomic.200409.gff.gz"
    }
  }
}