2021-03-10 10:16:18 +00:00
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// Profile config names for nf-core/configs
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params {
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// Specific nf-core/configs params
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2021-03-11 08:29:03 +00:00
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config_profile_contact = 'Friederike Hanssen (@FriederikeHanssen)'
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2021-03-10 10:16:18 +00:00
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config_profile_description = 'nf-core/sarek CFC profile provided by nf-core/configs'
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}
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// Specific nf-core/sarek process configuration
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process {
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withName:'StrelkaSingle|Strelka|StrelkaBP|MantaSingle|Manta' {
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2021-03-11 15:11:41 +00:00
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memory = 55.GB
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cpus = 19
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2021-03-10 10:16:18 +00:00
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}
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withName:'MSIsensor_scan|MSIsensor_msi' {
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2021-03-11 15:11:41 +00:00
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memory = 55.GB
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2021-03-10 10:16:18 +00:00
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}
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withName:BamQC {
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2021-03-11 08:27:08 +00:00
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memory = 372.GB
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2021-03-10 10:16:18 +00:00
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}
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withName:MapReads{
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2021-03-18 10:06:38 +00:00
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cpus = 20
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2021-03-18 10:10:00 +00:00
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memory = 59.GB
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2021-03-10 10:16:18 +00:00
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}
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2021-03-18 10:06:38 +00:00
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}
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