nf-configs/conf/holo_globe

//Profile config names for nf-core/configs
params {
  config_profile_description = 'Section for Hologenomics @ Globe Institute, University of Copenhagen - seg_globe profile provided by nf-core/configs.'
  config_profile_contact = 'Aashild Vaagene (@ashildv)'
  config_profile_url = 'https://globe.ku.dk/research/evogenomics/'
  max_memory = 250.GB
  max_cpus = 35
  max_time = 720.h
}

conda {
   enabled=true
   cacheDir = '/maps/projects/mjolnir1/people/prj558/cache/conda'
}
    

//singularity {
//  enabled = true
//  autoMounts = true
// cacheDir = '/shared/volume/hologenomics/data/cache/nf-eager/singularity'
//}

process {
 executor = 'slurm'
 queue = { task.time < 24.h ? 'hologenomics-short' : task.time < 168.h ? 'hologenomics' : 'hologenomics-long' }
}
        
cleanup = true
       
executor {
  queueSize = 8
}