nf-configs/conf/pipeline/eager/mpcdf.config

// Profile config names for nf-core/configs

profile {
  cobra {
    params {
      // Specific nf-core/configs params
      config_profile_contact = 'James Fellows Yates (@jfy133)'
      config_profile_description = 'nf-core/eager MPCDF cobra profile provided by nf-core/configs'
    }
    process {

      withName: malt {
        maxRetries = 1
        memory = 725.GB
        cpus = 40
        time = 24.h
      }
      
      withLabel:'sc_tiny'{
        cpus = { check_max( 1, 'cpus' ) }
        memory = { check_max( 1.GB * task.attempt, 'memory' ) }
        time = 24.h
      }

      withLabel:'sc_small'{
        cpus = { check_max( 1, 'cpus' ) }
        memory = { check_max( 4.GB * task.attempt, 'memory' ) }
        time = 24.h
      }

      withLabel:'sc_medium'{
        cpus = { check_max( 1, 'cpus' ) }
        memory = { check_max( 8.GB * task.attempt, 'memory' ) }
        time = 24.h
      }

      withLabel:'mc_small'{
        cpus = { check_max( 2 * task.attempt, 'cpus' ) }
        memory = { check_max( 4.GB * task.attempt, 'memory' ) }
        time = 24.h
      }

      withLabel:'mc_medium' {
        cpus = { check_max( 4 * task.attempt, 'cpus' ) }
        memory = { check_max( 8.GB * task.attempt, 'memory' ) }
        time = 24.h
      }

      withLabel:'mc_large'{
        cpus = { check_max( 8 * task.attempt, 'cpus' ) }
        memory = { check_max( 16.GB * task.attempt, 'memory' ) }
        time = 24.h
      }

      withLabel:'mc_huge'{
        cpus = { check_max( 32 * task.attempt, 'cpus' ) }
        memory = { check_max( 256.GB * task.attempt, 'memory' ) }
        time = 24.h
      }
    }
  }
  raven {
  // Specific nf-core/eager process configuration
      params {
        // Specific nf-core/configs params
        config_profile_contact = 'James Fellows Yates (@jfy133)'
        config_profile_description = 'nf-core/eager MPCDF raven profile provided by nf-core/configs'
      }
    process {

      withName: malt {
        maxRetries = 1
        memory = 2000000.MB
        cpus = 72
        time = 24.h
      }
      
      withLabel:'sc_tiny'{
        cpus = { check_max( 1, 'cpus' ) }
        memory = { check_max( 1.GB * task.attempt, 'memory' ) }
        time = 24.h
      }

      withLabel:'sc_small'{
        cpus = { check_max( 1, 'cpus' ) }
        memory = { check_max( 4.GB * task.attempt, 'memory' ) }
        time = 24.h
      }

      withLabel:'sc_medium'{
        cpus = { check_max( 1, 'cpus' ) }
        memory = { check_max( 8.GB * task.attempt, 'memory' ) }
        time = 24.h
      }

      withLabel:'mc_small'{
        cpus = { check_max( 2 * task.attempt, 'cpus' ) }
        memory = { check_max( 4.GB * task.attempt, 'memory' ) }
        time = 24.h
      }

      withLabel:'mc_medium' {
        cpus = { check_max( 4 * task.attempt, 'cpus' ) }
        memory = { check_max( 8.GB * task.attempt, 'memory' ) }
        time = 24.h
      }

      withLabel:'mc_large'{
        cpus = { check_max( 8 * task.attempt, 'cpus' ) }
        memory = { check_max( 16.GB * task.attempt, 'memory' ) }
        time = 24.h
      }

      withLabel:'mc_huge'{
        cpus = { check_max( 72, 'cpus' ) }
        memory = { check_max( 240.GB * task.attempt, 'memory' ) }
        time = 24.h
      }
    }
  }
}