mirror of
https://github.com/MillironX/nf-configs.git
synced 2024-11-11 04:23:10 +00:00
18 lines
827 B
Text
18 lines
827 B
Text
|
// scflow/imperial specific profile config
|
||
|
|
|
||
|
|
params {
|
||
|
|
// Config Params
|
||
|
|
config_profile_description = 'Imperial College London - HPC - nf-core/scFlow Profile -- provided by nf-core/configs.'
|
||
|
|
config_profile_contact = 'Combiz Khozoie (c.khozoie@imperial.ac.uk)'
|
||
|
|
|
||
|
|
// Analysis Resource Params
|
||
|
|
ctd_folder = "/rds/general/user/$USER/projects/ukdrmultiomicsproject/live/Analyses/scFlowResources/refs/ctd"
|
||
|
|
ensembl_mappings = "/rds/general/user/$USER/projects/ukdrmultiomicsproject/live/Analyses/scFlowResources/src/ensembl-ids/ensembl_mappings.tsv"
|
||
|
|
}
|
||
|
|
|
||
|
|
singularity {
|
||
|
|
enabled = true
|
||
|
|
autoMounts = true
|
||
|
|
cacheDir = "/rds/general/user/$USER/projects/ukdrmultiomicsproject/live/.singularity-cache"
|
||
|
|
runOptions = "-B /rds/,/rdsgpfs/,/rds/general/user/$USER/ephemeral/tmp/:/tmp,/rds/general/user/$USER/ephemeral/tmp/:/var/tmp"
|
||
|
|
}
|