nf-configs/conf/munin.config

// Profile config names for nf-core/configs

params {
  // Specific nf-core/configs params
  config_profile_contact = 'Szilveszter Juhos (@szilva)'
  config_profile_description = 'MUNIN profile provided by nf-core/configs.'
  config_profile_url = 'https://ki.se/forskning/barntumorbanken'

  // Local AWS iGenomes reference file paths on munin
  igenomes_base = '/data1/references/igenomes/'
}

process {
  executor = 'local'
  maxForks = 46
}

// To use singularity, use nextflow run -profile munin
singularity {
  enabled = true
  cacheDir = '/data1/containers/'
}

// To use docker, use nextflow run -profile munin,docker
docker {
  enabled = false
  mountFlags = 'z'
  fixOwnership = true
}