2019-01-09 16:27:55 +00:00
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//Profile config names for nf-core/configs
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params {
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2019-08-07 09:55:56 +00:00
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config_profile_description = 'MUNIN profile provided by nf-core/configs.'
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2019-01-09 16:27:55 +00:00
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config_profile_contact = 'Szilveszter Juhos (@szilva)'
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config_profile_url = ''
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}
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process {
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executor = 'local'
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2019-08-07 09:10:48 +00:00
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maxForks = 48
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2019-01-09 16:27:55 +00:00
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}
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2019-08-07 09:55:56 +00:00
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// To use singularity, use nextflow run -profile munin,singularity
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2019-01-11 14:28:10 +00:00
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singularity {
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2019-01-11 13:37:12 +00:00
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enabled = true
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}
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2019-08-07 09:10:48 +00:00
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// To use docker, use nextflow run -profile munin,docker
|
2019-01-11 14:28:10 +00:00
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docker {
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enabled = false
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mountFlags = 'z'
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fixOwnership = true
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}
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2019-01-09 16:27:55 +00:00
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params {
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2019-08-07 09:10:48 +00:00
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// general params
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max_memory = 754.GB
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max_cpus = 48
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2019-01-09 16:27:55 +00:00
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max_time = 72.h
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2019-08-07 09:10:48 +00:00
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2019-08-07 09:55:56 +00:00
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// Local AWS iGenomes reference file paths
|
2019-08-07 09:10:48 +00:00
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igenome_base = '/data1/references/igenomes/'
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}
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