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Renamed star_index directory
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1 changed files with 3 additions and 2 deletions
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@ -23,8 +23,9 @@ params {
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known_indels_tbi = '/data1/references/annotations/GATK_bundle/Mills_and_1000G_gold_standard.indels.hg38.vcf.gz.tbi'
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known_indels_tbi = '/data1/references/annotations/GATK_bundle/Mills_and_1000G_gold_standard.indels.hg38.vcf.gz.tbi'
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// STAR index
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// STAR index
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star_index = '/data1/references/CTAT_GenomeLib_v37_Mar012021/GRCh38_gencode_v37_CTAT_lib_Mar012021.plug-n-play/ctat_genome_lib_build_dir/star150bp.idx/'
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star_index = '/data1/references/CTAT_GenomeLib_v37_Mar012021/GRCh38_gencode_v37_CTAT_lib_Mar012021.plug-n-play/ctat_genome_lib_build_dir/STAR.2.7.9a_2x151bp/'
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read_length = 151
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// Annotation settings
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// Annotation settings
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annotation_cache = true
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annotation_cache = true
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cadd_cache = true
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cadd_cache = true
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