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Removed Conda, added automount Singularity
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1 changed files with 4 additions and 3 deletions
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@ -23,8 +23,6 @@ process {
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beforeScript =
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"""
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. /etc/profile.d/modules.sh
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sleep 2
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module load 'anaconda/5.3.1'
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module load 'roslin/singularity/3.5.3'
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export SINGULARITY_TMPDIR="\$TMPDIR"
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"""
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@ -46,4 +44,7 @@ env {
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singularity {
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envWhitelist = "SINGULARITY_TMPDIR"
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runOptions = '-p'
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}
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enabled = true
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autoMounts = true
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}
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