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Update eva.config
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1 changed files with 2 additions and 1 deletions
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@ -193,7 +193,7 @@ process {
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cache = false
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clusterOptions = { "-S /bin/bash -V -l h=!(bionode06)" }
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beforeScript = 'export JAVA_TOOL_OPTIONS="-XX:ParallelGCThreads=1"; export OPENBLAS_NUM_THREADS=1; export OMP_NUM_THREADS=1'
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clusterOptions = { "-S /bin/bash -V -l h_vmem=${(task.memory.toMega() * 4)}M" }
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clusterOptions = { "-S /bin/bash -V -l h_vmem=${(task.memory.toMega() * 8)}M" }
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errorStrategy = { task.exitStatus in [1,143,137,104,134,139,140] ? 'retry' : 'finish' }
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}
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@ -207,6 +207,7 @@ process {
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withName:multiqc {
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beforeScript = 'export OPENBLAS_NUM_THREADS=1; export OMP_NUM_THREADS=1;'
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clusterOptions = { "-S /bin/bash -V -j y -o output.log -l h_vmem=${task.memory.toGiga()}G" }
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}
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}
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