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Update mpcdf.config
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1 changed files with 25 additions and 2 deletions
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@ -9,7 +9,7 @@ profiles {
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cobra {
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// Does not have singularity! Conda module must be used, but it is
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// recommended to set NXF_CONDA_CACHEDIR var in ~/.bash{_profile,rc}
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// To create common cache dir (only until /u/ periodically cleared!)
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// To create common cache dir
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process {
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beforeScript = 'module load anaconda/3/2020.02'
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@ -21,10 +21,33 @@ profiles {
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}
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params {
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config_profile_description = 'MPCDF cobra profile provided by nf-core/configs.'
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config_profile_description = 'MPCDF cobra profile (unofficially) provided by nf-core/configs.'
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max_memory = 725.GB
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max_cpus = 80
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max_time = 24.h
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}
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}
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raven {
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// Does not have singularity! Conda module must be used, but it is
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// recommended to set NXF_CONDA_CACHEDIR var in ~/.bash{_profile,rc}
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// to create common cache dir
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process {
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beforeScript = 'module load anaconda/3/2020.02'
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executor = 'slurm'
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}
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executor {
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queueSize = 8
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}
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params {
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config_profile_description = 'MPCDF raven profile (unofficially) provided by nf-core/configs.'
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max_memory = 368.GB
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max_cpus = 192
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max_time = 24.h
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}
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}
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}
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