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Update mpcdf.config

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James A. Fellows Yates 2020-10-15 14:22:35 +02:00 committed by GitHub
parent 11f1fb71db
commit 05deeca2d6
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1 changed files with 25 additions and 2 deletions
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27
conf/mpcdf.config
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@ -9,7 +9,7 @@ profiles {
cobra {
// Does not have singularity! Conda module must be used, but it is
// recommended to set NXF_CONDA_CACHEDIR var in ~/.bash{_profile,rc}
// To create common cache dir (only until /u/ periodically cleared!)
// To create common cache dir
process {
beforeScript = 'module load anaconda/3/2020.02'
@ -21,10 +21,33 @@ profiles {
}
params {
config_profile_description = 'MPCDF cobra profile provided by nf-core/configs.'
config_profile_description = 'MPCDF cobra profile (unofficially) provided by nf-core/configs.'
max_memory = 725.GB
max_cpus = 80
max_time = 24.h
}
}
raven {
// Does not have singularity! Conda module must be used, but it is
// recommended to set NXF_CONDA_CACHEDIR var in ~/.bash{_profile,rc}
// to create common cache dir
process {
beforeScript = 'module load anaconda/3/2020.02'
executor = 'slurm'
}
executor {
queueSize = 8
}
params {
config_profile_description = 'MPCDF raven profile (unofficially) provided by nf-core/configs.'
max_memory = 368.GB
max_cpus = 192
max_time = 24.h
}
}
}