From 079258ebbbd6112c67a07ebfb3b35fd5c3fe4bf1 Mon Sep 17 00:00:00 2001 From: Rogan Grant Date: Thu, 29 Jul 2021 11:38:40 -0500 Subject: [PATCH] Minor text edits --- docs/nu_genomics.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/nu_genomics.md b/docs/nu_genomics.md index 901bcd0..4c2034f 100644 --- a/docs/nu_genomics.md +++ b/docs/nu_genomics.md @@ -33,4 +33,4 @@ module load graphviz/2.40.1 ## Use of iGenomes A local copy of the iGenomes resource with all commonly used genomes has been made available for all of Quest so you should be able to run the pipeline against any reference available in the `igenomes.config` specific to the nf-core pipeline. -You can do this by simply using the `--genome ` parameter. While you can technically "stream" genomes from iGenomes directly using the pipeline, this is a substantial use of bandwidth and resources on both ends, and potentially poses reproducibility issues later on. Please use the local copies unless absolutely necessary, and save your own to your personal allocation where necessary. \ No newline at end of file +You can do this by simply using the `--genome ` parameter. While you can technically "stream" genomes from iGenomes directly using the pipeline, this is a substantial use of bandwidth and resources on both ends, and potentially poses reproducibility issues later on. Please use the local copies unless absolutely necessary, and save your custom genomes to your personal allocation where necessary.