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Increased memory and time for GATK4_MARKDUPLICATES in sbc_sharc.config for sarek

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lquayle88 2022-10-01 23:15:13 +01:00
parent dbb3b3b44b
commit 10c1490265
1 changed files with 1 additions and 0 deletions
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conf/pipeline/sarek/sbc_sharc.config
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@ -76,6 +76,7 @@ process {
withName:'GATK4_MARKDUPLICATES' {
memory = { check_max( 20.GB * task.attempt, 'memory' ) }
time = { check_max( 8.h * task.attempt, 'time' ) }
}
withName:'FREEBAYES|SAMTOOLS_STATS|SAMTOOLS_INDEX|UNZIP' {