diff --git a/conf/pasteur.config b/conf/pasteur.config new file mode 100644 index 0000000..03971dc --- /dev/null +++ b/conf/pasteur.config @@ -0,0 +1,24 @@ +//Profile config names for nf-core/configs +params { + config_profile_description = 'The Institut Pasteur HPC cluster profile' + config_profile_contact = 'Remi Planel (@rplanel)' + config_profile_url = 'https://research.pasteur.fr/en/service/tars-cluster/' +} + +singularity { + enabled = true + autoMounts = true + runOptions = '-B /local/scratch:/tmp' +} + +process { + executor = 'slurm' + clusterOptions = { "-A $params.project ${params.clusterOptions ?: ''}" } +} + +params { + igenomesIgnore = true + max_memory = 256.GB + max_cpus = 28 + max_time = 24.h +}